RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	OR11G2	Q8NGC1	345 aa		18.9	■□□□□ 0.62
IRF3-221	ENST00000598808	EBPL	Q9BY08	206 aa		18.9	■□□□□ 0.62
IRF3-221	ENST00000598808	DDX31	Q9H8H2	851 aa	Known RBP	18.9	■□□□□ 0.62
IRF3-221	ENST00000598808	WDR41	Q9HAD4	459 aa		18.9	■□□□□ 0.62
IRF3-221	ENST00000598808	ZNF160	Q9HCG1	818 aa		18.9	■□□□□ 0.62
IRF3-221	ENST00000598808	PRDM9	Q9NQV7	894 aa		18.9	■□□□□ 0.62
IRF3-221	ENST00000598808	KCNMB2	Q9Y691	235 aa		18.9	■□□□□ 0.62
IRF3-221	ENST00000598808	NSG1	A0A0A6YYJ2	146 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	GNG14	A0A1W2PPG7	69 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	SLC28A1	O00337	649 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	RGS14	O43566	566 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	PCDH7	O60245	1069 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	PRKRA	O75569	313 aa	Known RBP	18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	SEC24D	O94855	1032 aa	Predicted RBP	18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	NR2F6	P10588	404 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	ESRRA	P11474	423 aa	Predicted RBP	18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	POLE2	P56282	527 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	OR4D2	P58180	307 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	IRX1	P78414	480 aa	Predicted RBP	18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	TNFRSF17	Q02223	184 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	ID2	Q02363	134 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	TBL3	Q12788	808 aa	Known RBP	18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	RAPSN	Q13702	412 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	NR6A1	Q15406	480 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	DCAF10	Q5QP82	559 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	QSOX2	Q6ZRP7	698 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	MED25	Q71SY5	747 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	ANKRD37	Q7Z713	158 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	ZNF595	Q8IYB9	648 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	TMEM102	Q8N9M5	508 aa	Predicted RBP	18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	APIP	Q96GX9	242 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	MAEL	Q96JY0	434 aa	Known RBP	18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	CCDC106	Q9BWC9	280 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	PFDN4	Q9NQP4	134 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	MS4A12	Q9NXJ0	267 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	TAGLN3	Q9UI15	199 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	ADAM29	Q9UKF5	820 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	ATG4B	Q9Y4P1	393 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	MMACHC	Q9Y4U1	282 aa		18.89	■□□□□ 0.61
IRF3-221	ENST00000598808	MYOCOS	A0A1B0GUC4	107 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	PIP5K1B	O14986	540 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	MYO1D	O94832	1006 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	FAM87A	P0C7U9	286 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	NQO1	P15559	274 aa	Known RBP	18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	ITGA3	P26006	1051 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	STX4	Q12846	297 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	PDCD2	Q16342	344 aa	Predicted RBP	18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	SFT2D3	Q587I9	215 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	C18orf63	Q68DL7	685 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	CPEB2	Q7Z5Q1	589 aa	Known RBP	18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	ACTRT2	Q8TDY3	377 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	NACC2	Q96BF6	587 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	PPP1R36	Q96LQ0	422 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	NECTIN3	Q9NQS3	549 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	PNO1	Q9NRX1	252 aa	Known RBP	18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	KCMF1	Q9P0J7	381 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	DNAJC15	Q9Y5T4	150 aa		18.88	■□□□□ 0.61
IRF3-221	ENST00000598808	GLOD5	A6NK44	160 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808		A8MUA0	341 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	CYR61	O00622	381 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	PCDH17	O14917	1159 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	LDB3	O75112	727 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	IFNA16	P05015	189 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	CYC1	P08574	325 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	COX6A1	P12074	109 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	TPP2	P29144	1249 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	IRAK1BP1	Q5VVH5	260 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	TMEM205	Q6UW68	189 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	NDUFAF7	Q7L592	441 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	PARP9	Q8IXQ6	854 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	CEP70	Q8NHQ1	597 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	CMTM5	Q96DZ9	223 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	CCT7	Q99832	543 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	RASSF4	Q9H2L5	321 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	RPF2	Q9H7B2	306 aa	Known RBP	18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	MEAF6	Q9HAF1	191 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	ATP13A2	Q9NQ11	1180 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	ARL8B	Q9NVJ2	186 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	RIC8B	Q9NVN3	520 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	TEX10	Q9NXF1	929 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	G3BP2	Q9UN86	482 aa	Known RBP	18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	POLR3H	Q9Y535	204 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	CACNA1G	O43497	2377 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	PCSK5	Q92824	1860 aa		18.87	■□□□□ 0.61
IRF3-221	ENST00000598808	IGHV1-45	A0A0A0MS14	117 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	GUCY1B2	O75343	617 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	SEC22B	O75396	215 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	RSL1D1	O76021	490 aa	Known RBP	18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	CBX6	O95503	412 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	AIFM1	O95831	613 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	HP	P00738	406 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	ALDH9A1	P49189	494 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	HSD17B7	P56937	341 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	SLC9B1	Q4ZJI4	515 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	TRIM46	Q7Z4K8	759 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	CPSF7	Q8N684	471 aa	Known RBP	18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	PLPP5	Q8NEB5	264 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	CHTF18	Q8WVB6	975 aa		18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	18.86	■□□□□ 0.61
IRF3-221	ENST00000598808	LRTM1	Q9HBL6	345 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms