RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ART5Q96L15 291 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 DGAT2Q96PD7 388 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 SERPINI1Q99574 410 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 MRPL57Q9BQC6 102 aaKnown RBP16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 PELOQ9BRX2 385 aaKnown RBP16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 HPF1Q9NWY4 346 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 COPS7AQ9UBW8 275 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 PCTPQ9UKL6 214 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 ERVK-11Q9UQG0 969 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 ASB4Q9Y574 426 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 MYO7BQ6PIF6 2116 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 TRIM49D1C9J1S8 452 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 DYRK3O43781 588 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 ETHE1O95571 254 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 SNRPAP09012 282 aaKnown RBP16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 AGAP20933 346 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 CCNG1P51959 295 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 ID2Q02363 134 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 MPEG1Q2M385 716 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 GGTA1PQ4G0N0 100 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 LGSNQ5TDP6 509 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 C18orf63Q68DL7 685 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 SP5Q6BEB4 398 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 XKRXQ6PP77 449 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 TIFABQ6ZNK6 161 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 C16orf47Q6ZP98 133 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 MRGPRGQ86SM5 289 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 OR4N5Q8IXE1 308 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 ST13P4Q8IZP2 240 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 PSD4Q8NDX1 1056 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 OR52B6Q8NGF0 335 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 NUBPLQ8TB37 319 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 SENP5Q96HI0 755 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 SCYL1Q96KG9 808 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 MRPL46Q9H2W6 279 aaKnown RBP16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 LIN28AQ9H9Z2 209 aaKnown RBP16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 ZBTB26Q9HCK0 441 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 TINAGQ9UJW2 476 aa16.63■□□□□ 0.25
CHMP2A-203ENST00000597209 WWP2O00308 870 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 TFECO14948 347 aaPredicted RBP16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 TMPRSS11DO60235 418 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 EEDO75530 441 aaKnown RBP16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 OR6B1O95007 311 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 GPR75O95800 540 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 IGKV3-11P04433 115 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 RPS17P08708 135 aaKnown RBP16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 FAM58BPP0C7Q3 252 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 ESRRAP11474 423 aaPredicted RBP16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 ALOX15P16050 662 aaPredicted RBP16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 ABOP16442 354 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 GALNSP34059 522 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 SOX3P41225 446 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 NEK2P51955 445 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 ADORA2A-AS1P86434 159 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 PLIN5Q00G26 463 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 FOLH1Q04609 750 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 TRAF3Q13114 568 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 PIGGQ5H8A4 983 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 OPN5Q6U736 354 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 CYP20A1Q6UW02 462 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 IL20RBQ6UXL0 311 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 TRMT10CQ7L0Y3 403 aaKnown RBP16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 NUDT13Q86X67 352 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 IFT20Q8IY31 132 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 CNPY4Q8N129 248 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 TMEM151AQ8N4L1 468 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 GOLM1Q8NBJ4 401 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 MYRIPQ8NFW9 859 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 SGCZQ96LD1 299 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 C1QTNF3Q9BXJ4 246 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 PLSCR2Q9NRY7 297 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 SH3BGRL2Q9UJC5 107 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 NFU1Q9UMS0 254 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 MEMO1Q9Y316 297 aa16.62■□□□□ 0.25
CHMP2A-203ENST00000597209 EXOC1LA0A1B0GW35 172 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 A0A1W2PR48 441 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 PRSS44E7EML9 344 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 HNRNPRO43390 633 aaKnown RBP16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 SMSP52788 366 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 SPRED3Q2MJR0 410 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 CMPK2Q5EBM0 449 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 FRG2Q64ET8 278 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 ADGRD1Q6QNK2 874 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 RTL4Q6ZR62 310 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 RGS9BPQ6ZS82 235 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 FGD2Q7Z6J4 655 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 LCA5Q86VQ0 697 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 EID3Q8N140 333 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 UHMK1Q8TAS1 419 aaKnown RBP16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 ZNF483Q8TF39 744 aaPredicted RBP16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 PHF10Q8WUB8 498 aaKnown RBP16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 MTBPQ96DY7 904 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 FBXL20Q96IG2 436 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 CDK15Q96Q40 435 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 FRG2BQ96QU4 278 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 WDR41Q9HAD4 459 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 DEPPQ9NTK1 212 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 AHSPQ9NZD4 102 aa16.61■□□□□ 0.25
CHMP2A-203ENST00000597209 ADAM29Q9UKF5 820 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms