RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SNX6Q9UNH7 406 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 SLC5A6Q9Y289 635 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 YARS2Q9Y2Z4 477 aaKnown RBP12.14□□□□□ -0.47
USE1-207ENST00000596136 NBPF19A0A087WUL8 3843 aa12.14□□□□□ -0.47
USE1-207ENST00000596136 MYOCOSA0A1B0GUC4 107 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 C17orf105B2RV13 164 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 G3V2L1 256 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 ITGA10O75578 1167 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 SLC25A12O75746 678 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 SUPT7LO94864 414 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 LDLRP01130 860 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 PDYNP01213 254 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 IGKV3-11P04433 115 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 RNF224P0DH78 156 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 TSPAN8P19075 237 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 ARL1P40616 181 aaPredicted RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 RNF4P78317 190 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 ID2Q02363 134 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 FOLH1Q04609 750 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 TBL3Q12788 808 aaKnown RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 C4orf17Q53FE4 359 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 TTC19Q6DKK2 380 aaPredicted RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 CYP20A1Q6UW02 462 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 HSDL2Q6YN16 418 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 GALNTL5Q7Z4T8 443 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 OR4N5Q8IXE1 308 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 GPALPP1Q8IXQ4 340 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 ST13P4Q8IZP2 240 aaPredicted RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 ZNF321PQ8N8H1 164 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 SLC2A12Q8TD20 617 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 THAP3Q8WTV1 239 aaPredicted RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 UBLCP1Q8WVY7 318 aaPredicted RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 RBM18Q96H35 190 aaKnown RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 SENP5Q96HI0 755 aaPredicted RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 FRMD6Q96NE9 622 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 ELOVL6Q9H5J4 265 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 PRM3Q9NNZ6 103 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 KLHL1Q9NR64 748 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 FARSBQ9NSD9 589 aaKnown RBP12.13□□□□□ -0.47
USE1-207ENST00000596136 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 MYO7BQ6PIF6 2116 aa12.13□□□□□ -0.47
USE1-207ENST00000596136 SERTM1A2A2V5 107 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 WASHC1A8K0Z3 465 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 FOXO6A8MYZ6 492 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 CDH16O75309 829 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 GLRA3O75311 464 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 PRKRAO75569 313 aaKnown RBP12.12□□□□□ -0.47
USE1-207ENST00000596136 WISP2O76076 250 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 OR4F21O95013 312 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 MLYCDO95822 493 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 AIFM1O95831 613 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 PROCP04070 461 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 NR2F6P10588 404 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 GP1BBP13224 206 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 HSD3B1P14060 373 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 COX7A2P14406 83 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 ALOX15P16050 662 aaPredicted RBP12.12□□□□□ -0.47
USE1-207ENST00000596136 TNNI3P19429 210 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 HSD3B2P26439 372 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 CRHR1P34998 444 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 CCT5P48643 541 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 SSR4P51571 173 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 HK2P52789 917 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 PKNOX1P55347 436 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 NAA20P61599 178 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 VSNL1P62760 191 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 PMP22Q01453 160 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 GALNT1Q10472 559 aaPredicted RBP12.12□□□□□ -0.47
USE1-207ENST00000596136 SPRED3Q2MJR0 410 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 KRTCAP3Q53RY4 240 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 DGAT2L6Q6ZPD8 337 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 PAGE2Q7Z2X7 111 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 SIAH3Q8IW03 269 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 OR5L2Q8NGL0 311 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 SELENOMQ8WWX9 145 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 RELTQ969Z4 430 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 CCDC126Q96EE4 140 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 FBXL20Q96IG2 436 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 DGAT2Q96PD7 388 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 PELOQ9BRX2 385 aaKnown RBP12.12□□□□□ -0.47
USE1-207ENST00000596136 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
USE1-207ENST00000596136 OR8D2Q9GZM6 311 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 GSTO2Q9H4Y5 243 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 WDR41Q9HAD4 459 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 RYDENQ9NUL5 291 aaKnown RBP12.12□□□□□ -0.47
USE1-207ENST00000596136 NMRK1Q9NWW6 199 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 GRID1Q9ULK0 1009 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
USE1-207ENST00000596136 MANBAO00462 879 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 PGRMC2O15173 223 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 PLIN3O60664 434 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 OR2J2O76002 312 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 KRT6AP02538 564 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 GBAP04062 536 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 KRT6BP04259 564 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 KLK1P06870 262 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 NUDT17P0C025 328 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 SLC35E2P0CK97 266 aa12.11□□□□□ -0.47
USE1-207ENST00000596136 SLCO1A2P46721 670 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms