RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 OR7A17O14581 309 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 HNRNPRO43390 633 aaKnown RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 PROM1O43490 865 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 SMIM24O75264 130 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 COL6A2P12110 1019 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 CNTFP26441 200 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 PTGER1P34995 402 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 BSGP35613 385 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 BUD31P41223 144 aaPredicted RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 SOX3P41225 446 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 CCNG1P51959 295 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 HNRNPH2P55795 449 aaKnown RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 TNFRSF17Q02223 184 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 XKRXQ6PP77 449 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 CHERPQ8IWX8 916 aaKnown RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 ZFP62Q8NB50 900 aaPredicted RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 UHMK1Q8TAS1 419 aaKnown RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 PPWD1Q96BP3 646 aaKnown RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 SENP5Q96HI0 755 aaPredicted RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 CDK15Q96Q40 435 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 LYARQ9NX58 379 aaKnown RBP21.78■■□□□ 1.08
LSM4-204ENST00000594828 XPR1Q9UBH6 696 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 ZNF180Q9UJW8 692 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 MEMO1Q9Y316 297 aa21.78■■□□□ 1.08
LSM4-204ENST00000594828 A0A087WUV0 522 aaPredicted RBP21.77■■□□□ 1.08
LSM4-204ENST00000594828 ARHGAP10A1A4S6 786 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 TRIM49D1C9J1S8 452 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 STX16-NPEPL1H3BU86 382 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 STX16O14662 325 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 PRRG2O14669 202 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 DYRK3O43781 588 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 HS6ST1O60243 411 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 EEDO75530 441 aaKnown RBP21.77■■□□□ 1.08
LSM4-204ENST00000594828 SMSP52788 366 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 ADORA2A-AS1P86434 159 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 FOLH1Q04609 750 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 CYP20A1Q6UW02 462 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 DOLPP1Q86YN1 238 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 OR52B6Q8NGF0 335 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 DCAKDQ8WVC6 231 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 MARVELD3Q96A59 401 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 MTFMTQ96DP5 389 aaKnown RBP21.77■■□□□ 1.08
LSM4-204ENST00000594828 ZNF717Q9BY31 904 aaPredicted RBP21.77■■□□□ 1.08
LSM4-204ENST00000594828 DDX31Q9H8H2 851 aaKnown RBP21.77■■□□□ 1.08
LSM4-204ENST00000594828 DEPPQ9NTK1 212 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 ASB4Q9Y574 426 aa21.77■■□□□ 1.08
LSM4-204ENST00000594828 CACNA1DQ01668 2161 aa21.77■■□□□ 1.07
LSM4-204ENST00000594828 A0A0A6YYD5 115 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 KIF2AO00139 706 aaPredicted RBP21.76■■□□□ 1.07
LSM4-204ENST00000594828 PRKRAO75569 313 aaKnown RBP21.76■■□□□ 1.07
LSM4-204ENST00000594828 PLIN5Q00G26 463 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 ZNF750Q32MQ0 723 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 MRM1Q6IN84 353 aaKnown RBP21.76■■□□□ 1.07
LSM4-204ENST00000594828 FGD2Q7Z6J4 655 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 AGAP11Q8TF27 550 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 PHF12Q96QT6 1004 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 SERPINI1Q99574 410 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 NTMT1Q9BV86 223 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 PCTPQ9UKL6 214 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 PPT2Q9UMR5 302 aa21.76■■□□□ 1.07
LSM4-204ENST00000594828 A0A1B0GTH9 108 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 A0A1W2PR48 441 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 TMPRSS11DO60235 418 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 CDC40O60508 579 aaKnown RBP eCLIP21.75■■□□□ 1.07
LSM4-204ENST00000594828 GPR75O95800 540 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 FAM58BPP0C7Q3 252 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 ALOX15P16050 662 aaPredicted RBP21.75■■□□□ 1.07
LSM4-204ENST00000594828 AGAP20933 346 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 HTR1EP28566 365 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 PTGS2P35354 604 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 CMPK2Q5EBM0 449 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 LGSNQ5TDP6 509 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 TTC19Q6DKK2 380 aaPredicted RBP21.75■■□□□ 1.07
LSM4-204ENST00000594828 OPN5Q6U736 354 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 DGAT2L6Q6ZPD8 337 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 RTL4Q6ZR62 310 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 NUDT13Q86X67 352 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 ART5Q96L15 291 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 MRPL57Q9BQC6 102 aaKnown RBP21.75■■□□□ 1.07
LSM4-204ENST00000594828 WDR41Q9HAD4 459 aa21.75■■□□□ 1.07
LSM4-204ENST00000594828 GLOD5A6NK44 160 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 ZNF354AO60765 605 aaPredicted RBP21.74■■□□□ 1.07
LSM4-204ENST00000594828 IGKV3-11P04433 115 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 SNRPAP09012 282 aaKnown RBP21.74■■□□□ 1.07
LSM4-204ENST00000594828 GRNP28799 593 aaKnown RBP21.74■■□□□ 1.07
LSM4-204ENST00000594828 ASPHQ12797 758 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 ZNF630Q2M218 657 aaPredicted RBP21.74■■□□□ 1.07
LSM4-204ENST00000594828 MPEG1Q2M385 716 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 FRG2Q64ET8 278 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 ST13P4Q8IZP2 240 aaPredicted RBP21.74■■□□□ 1.07
LSM4-204ENST00000594828 OR2M7Q8NG81 312 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 OR52N2Q8NGI0 321 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 KIF18AQ8NI77 898 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 NUBPLQ8TB37 319 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 SGCZQ96LD1 299 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 NSUN5Q96P11 429 aaKnown RBP21.74■■□□□ 1.07
LSM4-204ENST00000594828 FRG2BQ96QU4 278 aa21.74■■□□□ 1.07
LSM4-204ENST00000594828 PELOQ9BRX2 385 aaKnown RBP21.74■■□□□ 1.07
LSM4-204ENST00000594828 MRPL46Q9H2W6 279 aaKnown RBP21.74■■□□□ 1.07
LSM4-204ENST00000594828 RUBCNLQ9H714 662 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms