RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 FGF17O60258 216 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 SUSD5O60279 629 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 TGFB1P01137 390 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 GSTA2P09210 222 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 PCNAP12004 261 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 DNASE1L1P49184 302 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 MRPS25P82663 173 aaKnown RBP22.1■■□□□ 1.13
LSM4-202ENST00000593564 KHDRBS2Q5VWX1 349 aaKnown RBP22.1■■□□□ 1.13
LSM4-202ENST00000593564 ZNF585AQ6P3V2 769 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 C3orf62Q6ZUJ4 267 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 ISCA2Q86U28 154 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 OR7G3Q8NG95 312 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 CMTM7Q96FZ5 175 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 SENP5Q96HI0 755 aaPredicted RBP22.1■■□□□ 1.13
LSM4-202ENST00000593564 DGAT2Q96PD7 388 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 ERP44Q9BS26 406 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 PRM3Q9NNZ6 103 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 SH2D2AQ9NP31 389 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 MS4A12Q9NXJ0 267 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 TUBA8Q9NY65 449 aaPredicted RBP22.1■■□□□ 1.13
LSM4-202ENST00000593564 FAM215AQ9Y5M1 114 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 MED13LQ71F56 2210 aa22.1■■□□□ 1.13
LSM4-202ENST00000593564 FAM187AA6NFU0 413 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 KERAO60938 352 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 SH3BGRLO75368 114 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 IGKV3-11P04433 115 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 SLC35E2BP0CK96 405 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 SPRP35270 261 aaPredicted RBP22.09■■□□□ 1.13
LSM4-202ENST00000593564 GMPRP36959 345 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 ASPHQ12797 758 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 BIKQ13323 160 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 ZNF791Q3KP31 576 aaPredicted RBP22.09■■□□□ 1.13
LSM4-202ENST00000593564 DEPDC1Q5TB30 811 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 GRTP1Q5TC63 336 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 RTL6Q6ICC9 239 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 B3GNT6Q6ZMB0 384 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 CTAGE3PQ8IX95 158 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 C9orf40Q8IXQ3 194 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 ATOH8Q96SQ7 321 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 ZNF559Q9BR84 538 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 DPH5Q9H2P9 285 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 OR51B5Q9H339 312 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 NMRAL1Q9HBL8 299 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 SLC24A3Q9HC58 644 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 ADGRE2Q9UHX3 823 aa22.09■■□□□ 1.13
LSM4-202ENST00000593564 K7EPI3 171 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 SAP18O00422 153 aaKnown RBP22.08■■□□□ 1.13
LSM4-202ENST00000593564 DYRK3O43781 588 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 CELA3AP09093 270 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 GLI4P10075 376 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 MAN2A2P49641 1150 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 GPX6P59796 221 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 DLG1Q12959 904 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 SLAMF1Q13291 335 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 SLC10A1Q14973 349 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 OR4C11Q6IEV9 310 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 OR4N5Q8IXE1 308 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 CLYBLQ8N0X4 340 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 OR10Q1Q8NGQ4 319 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 SLC22A8Q8TCC7 542 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 TANKQ92844 425 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 SARAFQ96BY9 339 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 ART5Q96L15 291 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 RPF2Q9H7B2 306 aaKnown RBP22.08■■□□□ 1.13
LSM4-202ENST00000593564 SEMA4BQ9NPR2 832 aaPredicted RBP22.08■■□□□ 1.13
LSM4-202ENST00000593564 OPTCQ9UBM4 332 aa22.08■■□□□ 1.13
LSM4-202ENST00000593564 ZFHX3Q15911 3703 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 ATP6AP2A0A1C7CYW4 349 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 SUPT3HB4E1H0 165 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 UBXN8O00124 270 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 KLK8O60259 260 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 HCN1O60741 890 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 WDR1O75083 606 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 SUPT3HO75486 399 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 ATP6AP2O75787 350 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 NADKO95544 446 aaPredicted RBP22.07■■□□□ 1.12
LSM4-202ENST00000593564 PIGAP37287 484 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 ZFP36L2P47974 494 aaKnown RBP22.07■■□□□ 1.12
LSM4-202ENST00000593564 PLIN5Q00G26 463 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 TBL3Q12788 808 aaKnown RBP22.07■■□□□ 1.12
LSM4-202ENST00000593564 SLC22A10Q63ZE4 541 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 GRHL2Q6ISB3 625 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 ADGRD1Q6QNK2 874 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 LYPD8Q6UX82 237 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 RAPH1Q70E73 1250 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 MAATS1Q7Z4T9 603 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 CMC1Q7Z7K0 106 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 SLC15A4Q8N697 577 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 PAQR8Q8TEZ7 354 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 RGMAQ96B86 450 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 RBM18Q96H35 190 aaKnown RBP22.07■■□□□ 1.12
LSM4-202ENST00000593564 FBXL20Q96IG2 436 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 SORBS1Q9BX66 1292 aaKnown RBP22.07■■□□□ 1.12
LSM4-202ENST00000593564 GRPEL1Q9HAV7 217 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 IGSF5Q9NSI5 407 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 RYDENQ9NUL5 291 aaKnown RBP22.07■■□□□ 1.12
LSM4-202ENST00000593564 GRHL1Q9NZI5 618 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 PHF11Q9UIL8 331 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 ACAD8Q9UKU7 415 aa22.07■■□□□ 1.12
LSM4-202ENST00000593564 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms