RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 FAM219BQ5XKK7 198 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 FRG2Q64ET8 278 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 TIFABQ6ZNK6 161 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 DGAT2L6Q6ZPD8 337 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 MDGA2Q7Z553 956 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 NUDT13Q86X67 352 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 SULF2Q8IWU5 870 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 OR4F6Q8NGB9 312 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 DOK4Q8TEW6 326 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 ZNF721Q8TF20 911 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 UCN3Q969E3 161 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
APOC1-208ENST00000592535 DGAT2Q96PD7 388 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 FRG2BQ96QU4 278 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 RASL10BQ96S79 203 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 SERPINI1Q99574 410 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 TXLNGYQ9BZA5 131 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 LYARQ9NX58 379 aaKnown RBP12.89□□□□□ -0.35
APOC1-208ENST00000592535 TMEM216Q9P0N5 145 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 PPT2Q9UMR5 302 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 KLF13Q9Y2Y9 288 aaPredicted RBP12.89□□□□□ -0.35
APOC1-208ENST00000592535 ASB4Q9Y574 426 aa12.89□□□□□ -0.35
APOC1-208ENST00000592535 A0A1W2PR48 441 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 GLOD5A6NK44 160 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 A8MVJ9 347 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 CCL21O00585 134 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 PPP6CO00743 305 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 ZNHIT1O43257 154 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 PROM1O43490 865 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 ASNA1O43681 348 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 PEX1O43933 1283 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 SLC19A2O60779 497 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 OR6B1O95007 311 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 FAM58BPP0C7Q3 252 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 COX7A2P14406 83 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 TSPAN8P19075 237 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 TLX1P31314 330 aaPredicted RBP12.88□□□□□ -0.35
APOC1-208ENST00000592535 RFC3P40938 356 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 BUD31P41223 144 aaPredicted RBP12.88□□□□□ -0.35
APOC1-208ENST00000592535 SOX3P41225 446 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 CDH13P55290 713 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 GPR85P60893 370 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 RNF4P78317 190 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 C3AR1Q16581 482 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.88□□□□□ -0.35
APOC1-208ENST00000592535 GGTA1PQ4G0N0 100 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 ZNF787Q6DD87 383 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 TTC19Q6DKK2 380 aaPredicted RBP12.88□□□□□ -0.35
APOC1-208ENST00000592535 CYP20A1Q6UW02 462 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 IL20RBQ6UXL0 311 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 MILR1Q7Z6M3 343 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 C7orf57Q8NEG2 295 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 ZNF483Q8TF39 744 aaPredicted RBP12.88□□□□□ -0.35
APOC1-208ENST00000592535 ASB15Q8WXK1 588 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 TANKQ92844 425 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 HPF1Q9NWY4 346 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 ERVK-11Q9UQG0 969 aa12.88□□□□□ -0.35
APOC1-208ENST00000592535 KLRC4-KLRK1H3BQV0 150 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 HRKO00198 91 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 ZNF354AO60765 605 aaPredicted RBP12.87□□□□□ -0.35
APOC1-208ENST00000592535 SEMA3DO95025 777 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 AIFM1O95831 613 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 NR2F6P10588 404 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 ALOX15P16050 662 aaPredicted RBP12.87□□□□□ -0.35
APOC1-208ENST00000592535 HSF1Q00613 529 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 PLIN5Q00G26 463 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 IFT88Q13099 833 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 SGO1Q5FBB7 561 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 LETMD1Q6P1Q0 360 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 GPALPP1Q8IXQ4 340 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 POGLUT1Q8NBL1 392 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 PSD4Q8NDX1 1056 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 OR8K3Q8NH51 312 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 RBM18Q96H35 190 aaKnown RBP12.87□□□□□ -0.35
APOC1-208ENST00000592535 CCDC120Q96HB5 630 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 SENP5Q96HI0 755 aaPredicted RBP12.87□□□□□ -0.35
APOC1-208ENST00000592535 MAGED4Q96JG8 741 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 C1QTNF3Q9BXJ4 246 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 TIMMDC1Q9NPL8 285 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 RRAGDQ9NQL2 400 aaPredicted RBP12.87□□□□□ -0.35
APOC1-208ENST00000592535 FARSBQ9NSD9 589 aaKnown RBP12.87□□□□□ -0.35
APOC1-208ENST00000592535 DEPPQ9NTK1 212 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 SUCOQ9UBS9 1254 aaKnown RBP12.87□□□□□ -0.35
APOC1-208ENST00000592535 COPS7AQ9UBW8 275 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 TINAGQ9UJW2 476 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 ZNF835Q9Y2P0 537 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 CACNA1DQ01668 2161 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 NCOA6Q14686 2063 aaPredicted RBP12.87□□□□□ -0.35
APOC1-208ENST00000592535 MAST4O15021 2626 aa12.87□□□□□ -0.35
APOC1-208ENST00000592535 IQANK1A0A1B0GTG1 560 aa12.86□□□□□ -0.35
APOC1-208ENST00000592535 A0A1W2PS29 197 aa12.86□□□□□ -0.35
APOC1-208ENST00000592535 PINLYPA6NC86 204 aa12.86□□□□□ -0.35
APOC1-208ENST00000592535 GOLGA8RI6L899 631 aa12.86□□□□□ -0.35
APOC1-208ENST00000592535 TFECO14948 347 aaPredicted RBP12.86□□□□□ -0.35
APOC1-208ENST00000592535 OR4F21O95013 312 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms