RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 OR14A16Q8NHC5 309 aa13.54□□□□□ -0.24
DDX39A-217ENST00000592391 AGAP11Q8TF27 550 aa13.54□□□□□ -0.24
DDX39A-217ENST00000592391 HBEGFQ99075 208 aa13.54□□□□□ -0.24
DDX39A-217ENST00000592391 TMEM109Q9BVC6 243 aa13.54□□□□□ -0.24
DDX39A-217ENST00000592391 IQCGQ9H095 443 aaKnown RBP13.54□□□□□ -0.24
DDX39A-217ENST00000592391 WDR41Q9HAD4 459 aa13.54□□□□□ -0.24
DDX39A-217ENST00000592391 AGPAT4Q9NRZ5 378 aa13.54□□□□□ -0.24
DDX39A-217ENST00000592391 ZNF223Q9UK11 482 aaPredicted RBP13.54□□□□□ -0.24
DDX39A-217ENST00000592391 PLLPQ9Y342 182 aa13.54□□□□□ -0.24
DDX39A-217ENST00000592391 ARHGAP10A1A4S6 786 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 CCDC151A5D8V7 595 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 C17orf105B2RV13 164 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 TCP11X1B4DZS4 312 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 H3BQF6 201 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 UBFD1O14562 309 aaKnown RBP13.53□□□□□ -0.24
DDX39A-217ENST00000592391 ULK1O75385 1050 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 AIFM1O95831 613 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 COX7A2P14406 83 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 TNNI3P19429 210 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 GNLYP22749 145 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 CD96P40200 585 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 CFAP157Q5JU67 520 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 CCNYL2Q5T2Q4 361 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 LIPMQ5VYY2 423 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 FRMD7Q6ZUT3 714 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 GBP7Q8N8V2 638 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-217ENST00000592391 GRHL3Q8TE85 626 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 DGAT2Q96PD7 388 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 MID1IP1Q9NPA3 183 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 TEX10Q9NXF1 929 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-217ENST00000592391 ANKRD10Q9NXR5 420 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 VPS29Q9UBQ0 182 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 PCDHGB6Q9Y5F9 930 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 SHANK1Q9Y566 2161 aa13.53□□□□□ -0.24
DDX39A-217ENST00000592391 PRRC2CQ9Y520 2896 aaKnown RBP13.53□□□□□ -0.24
DDX39A-217ENST00000592391 GLOD5A6NK44 160 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 FCHO1O14526 889 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 ZFAND5O76080 213 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 GPR75O95800 540 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 DDAH2O95865 285 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 ALOX15P16050 662 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 TRHRP34981 398 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 UQCRFS1P47985 274 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 HTR6P50406 440 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 ST13P50502 369 aaKnown RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 MAPK12P53778 367 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 PLIN5Q00G26 463 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 OC90Q02509 493 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 PCLAFQ15004 111 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 OR1C1Q15619 314 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 ZNF766Q5HY98 468 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 OR52E8Q6IFG1 317 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 FAM180AQ6UWF9 173 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 HSDL2Q6YN16 418 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 ST13P4Q8IZP2 240 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 C1orf52Q8N6N3 182 aaKnown RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 HORMAD2Q8N7B1 307 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 MDS2Q8NDY4 140 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 SLC2A12Q8TD20 617 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 THAP3Q8WTV1 239 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 FAR1Q8WVX9 515 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 RBM18Q96H35 190 aaKnown RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 SIGLEC12Q96PQ1 595 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 KCNA7Q96RP8 456 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 PELOQ9BRX2 385 aaKnown RBP13.52□□□□□ -0.25
DDX39A-217ENST00000592391 ACPTQ9BZG2 426 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 OR8D2Q9GZM6 311 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 TIMM22Q9Y584 194 aa13.52□□□□□ -0.25
DDX39A-217ENST00000592391 SERTM1A2A2V5 107 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 WASHC1A8K0Z3 465 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 PGRMC2O15173 223 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 DYRK3O43781 588 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 PRKNO60260 465 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-217ENST00000592391 GUCY1B2O75343 617 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 NEURL1O76050 574 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 ZIC2O95409 532 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-217ENST00000592391 CBX6O95503 412 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 CHN1P15882 459 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 HLCSP50747 726 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 FOXA1P55317 472 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 ZNF844Q08AG5 666 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 NR6A1Q15406 480 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 KRT71Q3SY84 523 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 NDUFAF5Q5TEU4 345 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 ZNF468Q5VIY5 522 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-217ENST00000592391 SPINK14Q6IE38 97 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 C10orf107Q8IVU9 208 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 BCORP1Q8N888 145 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 ZNF321PQ8N8H1 164 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 CHTF18Q8WVB6 975 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 UCN3Q969E3 161 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 PPWD1Q96BP3 646 aaKnown RBP13.51□□□□□ -0.25
DDX39A-217ENST00000592391 FAM111AQ96PZ2 611 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 TAAR6Q96RI8 345 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 SMC6Q96SB8 1091 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 TRIM45Q9H8W5 580 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-217ENST00000592391 LRFN1Q9P244 771 aa13.51□□□□□ -0.25
DDX39A-217ENST00000592391 RP1L1Q8IWN7 2480 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-217ENST00000592391 TMEM200CA6NKL6 621 aa13.5□□□□□ -0.25
DDX39A-217ENST00000592391 OR10H2O60403 315 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms