RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 DUSP7Q16829 419 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 NDUFAF5Q5TEU4 345 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 MRM1Q6IN84 353 aaKnown RBP14.94□□□□□ -0.02
MBD1-227ENST00000592060 GPR153Q6NV75 609 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 Q6ZPB1 254 aaPredicted RBP14.94□□□□□ -0.02
MBD1-227ENST00000592060 GPR32P1Q8NGA4 272 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 MS4A6EQ96DS6 147 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 NIPSNAP1Q9BPW8 284 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 GLIPR2Q9H4G4 154 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 SYNPO2LQ9H987 977 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 ENPP5Q9UJA9 477 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 KCND3Q9UK17 655 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 SCML1Q9UN30 329 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 RNF6Q9Y252 685 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 SH3GLB1Q9Y371 365 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 CCDC88CQ9P219 2028 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 POM121BA6NF01 834 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 AXIN1O15169 862 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 FAM20BO75063 409 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 NDUFS2O75306 463 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 MT-ND2P03891 347 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 RHCEP18577 417 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 CD72P21854 359 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 PUM1Q14671 1186 aaKnown RBP eCLIP14.93□□□□□ -0.02
MBD1-227ENST00000592060 SPDYE7PQ495Y7 208 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 ZNF425Q6IV72 752 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 OR9Q2Q8NGE9 314 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D15Q8TC07 691 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 OR1E3Q8WZA6 343 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 AMDHD1Q96NU7 426 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 CCNB1IP1Q9NPC3 277 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 PRDM7Q9NQW5 492 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 RASSF1Q9NS23 344 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 PSME2Q9UL46 239 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 ASB4Q9Y574 426 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 HEBP2Q9Y5Z4 205 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 C5orf58C9J3I9 102 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 ANHXE9PGG2 379 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 MAN2B1O00754 1011 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 MFN2O95140 757 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 EML2O95834 649 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 IFNW1P05000 195 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 CBLP22681 906 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 GRK3P35626 688 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 MAP2K4P45985 399 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 CCT3P49368 545 aaKnown RBP14.93□□□□□ -0.02
MBD1-227ENST00000592060 CLDN2P57739 230 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 KCNC4Q03721 635 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 ABHD17CQ6PCB6 329 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 USP30Q70CQ3 517 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 ANKRD13BQ86YJ7 626 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 RAB8BQ92930 207 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 MACROD1Q9BQ69 325 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 SLC35C2Q9NQQ7 365 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D29Q9UFV1 150 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
MBD1-227ENST00000592060 MYO10Q9HD67 2058 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 LRP4O75096 1905 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 PRAMEF27A3QJZ7 478 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 ARRDC5A6NEK1 342 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 PCDH17O14917 1159 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 ERI3O43414 337 aaKnown RBP14.92□□□□□ -0.02
MBD1-227ENST00000592060 RGS10O43665 173 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 PRKRAO75569 313 aaKnown RBP14.92□□□□□ -0.02
MBD1-227ENST00000592060 VIPP01282 170 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 ZNF182P17025 639 aaPredicted RBP14.92□□□□□ -0.02
MBD1-227ENST00000592060 HIST1H1TP22492 207 aaPredicted RBP14.92□□□□□ -0.02
MBD1-227ENST00000592060 ARFIP1P53367 373 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 LIM2P55344 173 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 AQP6Q13520 282 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 LRRC32Q14392 662 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 TOR1AIP1Q5JTV8 583 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 TPRG1LQ5T0D9 272 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 AP1ARQ63HQ0 302 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 MFSD9Q8NBP5 474 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 ZNF540Q8NDQ6 660 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 DENND6BQ8NEG7 585 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 OR8K5Q8NH50 307 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 IPCEF1Q8WWN9 437 aaPredicted RBP14.92□□□□□ -0.02
MBD1-227ENST00000592060 JPH3Q8WXH2 748 aaPredicted RBP14.92□□□□□ -0.02
MBD1-227ENST00000592060 DNASE1L2Q92874 299 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 SIPA1Q96FS4 1042 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 SLC35G5Q96KT7 338 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 FAIM2Q9BWQ8 316 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 CD93Q9NPY3 652 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 ZSCAN32Q9NX65 697 aa14.92□□□□□ -0.02
MBD1-227ENST00000592060 WARS2Q9UGM6 360 aaKnown RBP14.92□□□□□ -0.02
MBD1-227ENST00000592060 WASHC1A8K0Z3 465 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 FFAR1O14842 300 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 PDE9AO76083 593 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 GADD45GO95257 159 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 ATP5A1P25705 553 aaKnown RBP14.91□□□□□ -0.02
MBD1-227ENST00000592060 CMPK1P30085 196 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 ENTPD1P49961 510 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 SLAMF1Q13291 335 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 TP53BP2Q13625 1128 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 GANABQ14697 944 aaKnown RBP14.91□□□□□ -0.02
MBD1-227ENST00000592060 NFATC4Q14934 902 aa14.91□□□□□ -0.02
MBD1-227ENST00000592060 SYT6Q5T7P8 510 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms