RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NDNQ99608 321 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 NPAS2Q99743 824 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 AIF1LQ9BQI0 150 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 ENKD1Q9H0I2 346 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 TP63Q9H3D4 680 aaPredicted RBP8.81□□□□□ -1
BRCA1-226ENST00000591534 TMBIM4Q9HC24 238 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 KCNJ16Q9NPI9 418 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 IARS2Q9NSE4 1012 aaKnown RBP8.81□□□□□ -1
BRCA1-226ENST00000591534 EDARQ9UNE0 448 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 MRPS33Q9Y291 106 aaKnown RBP8.81□□□□□ -1
BRCA1-226ENST00000591534 MMACHCQ9Y4U1 282 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 KCNE2Q9Y6J6 123 aa8.81□□□□□ -1
BRCA1-226ENST00000591534 ADGRG4Q8IZF6 3080 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 MYO7BQ6PIF6 2116 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 TCRBV16S1A1N1A0A5B0 115 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 POC1B-GALNT4F8VUJ3 575 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 C19orf84I3L1E1 186 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 ACOT7O00154 380 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 SMAD7O15105 426 aaKnown RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 TM9SF1O15321 606 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 PEX1O43933 1283 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 CDC40O60508 579 aaKnown RBP eCLIP8.8□□□□□ -1
BRCA1-226ENST00000591534 EIF4EBP3O60516 100 aaPredicted RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 H2AFYO75367 372 aaKnown RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 SNUPNO95149 360 aaKnown RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 ZWINTO95229 277 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 GSTA1P08263 222 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 ZNF888P0CJ79 500 aaPredicted RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 GSTM2P28161 218 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 KIR3DL1P43629 444 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 MEOX1P50221 254 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 SERPINB8P50452 374 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 NAA20P61599 178 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 STXBP1P61764 594 aaKnown RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 POU4F1Q01851 419 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 ASPHQ12797 758 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 RCN2Q14257 317 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 FASTKD3Q14CZ7 662 aaKnown RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 UAP1Q16222 522 aaPredicted RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 KBTBD12Q3ZCT8 623 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 CES4AQ5XG92 561 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 KLC3Q6P597 504 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 TRMT10BQ6PF06 316 aaKnown RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 PAQR3Q6TCH7 311 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 TIFABQ6ZNK6 161 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 CYP4Z2PQ8N1L4 340 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 ARMC10Q8N2F6 343 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 PPM1NQ8N819 430 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 TTLQ8NG68 377 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 OR5T3Q8NGG3 340 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 OR56A3Q8NH54 315 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 SLC5A11Q8WWX8 675 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 FBXL8Q96CD0 374 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 DMRTA2Q96SC8 542 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 RHOJQ9H4E5 214 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 PIF1Q9H611 641 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 PELI2Q9HAT8 420 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 POPDC3Q9HBV1 291 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 ZNF446Q9NWS9 450 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 DCDC2Q9UHG0 476 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 ADAMTS6Q9UKP5 1117 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 FBXW2Q9UKT8 454 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 ERVK-11Q9UQG0 969 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 YARS2Q9Y2Z4 477 aaKnown RBP8.8□□□□□ -1
BRCA1-226ENST00000591534 ASB1Q9Y576 335 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 PDZD2O15018 2839 aa8.8□□□□□ -1
BRCA1-226ENST00000591534 CSMD2Q7Z408 3487 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 TRBV11-1A0A0K0K1C0 115 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 A0A1B0GTH9 108 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 FAM47E-STBD1D6RA91 191 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 PIAS1O75925 651 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 ZFAND5O76080 213 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 SERPINA6P08185 405 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 DRD2P14416 443 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 TFEBP19484 476 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 PTGER1P34995 402 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 GIPRP48546 466 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 SSR4P51571 173 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 CDKN2DP55273 166 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 HSD17B7P56937 341 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 GPX6P59796 221 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 HSF1Q00613 529 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 RBBP5Q15291 538 aaKnown RBP8.79□□□□□ -1
BRCA1-226ENST00000591534 HECTD2Q5U5R9 776 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 C3P1Q6ZMU1 363 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 MBOAT1Q6ZNC8 495 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 CD163Q86VB7 1156 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 CLYBLQ8N0X4 340 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 KIF2BQ8N4N8 673 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 B3GNT7Q8NFL0 401 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 LILRB4Q8NHJ6 448 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 C16orf52Q8NHV5 167 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 UTP15Q8TED0 518 aaKnown RBP8.79□□□□□ -1
BRCA1-226ENST00000591534 CREB3L4Q8TEY5 395 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 PYCR2Q96C36 320 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 VMP1Q96GC9 406 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 ZNF559Q9BR84 538 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 NPLQ9BXD5 320 aaPredicted RBP8.79□□□□□ -1
BRCA1-226ENST00000591534 CAPS2Q9BXY5 557 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms