RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 C16orf47Q6ZP98 133 aaPredicted RBP9.65□□□□□ -0.86
VPS4B-207ENST00000591519 UBE3DQ7Z6J8 389 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 MARVELD2Q8N4S9 558 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 PSD4Q8NDX1 1056 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 OR2M7Q8NG81 312 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 ASB5Q8WWX0 329 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 CCT6BQ92526 530 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 SDCCAG3Q96C92 435 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 SGCZQ96LD1 299 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 KCNC2Q96PR1 638 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 F2RL3Q96RI0 385 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 RASL10BQ96S79 203 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 TBCDQ9BTW9 1192 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 ALOXE3Q9BYJ1 711 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 ROGDIQ9GZN7 287 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 TSPYL1Q9H0U9 437 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 ACSS3Q9H6R3 686 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 ZDHHC11Q9H8X9 412 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 CLCA3PQ9Y6N3 262 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 ZNF407Q9C0G0 2248 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 POLQO75417 2590 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 A0A1B0GVC2 190 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 OR14I1A6ND48 311 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 A8MVJ9 347 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 GLSO94925 669 aaPredicted RBP9.64□□□□□ -0.87
VPS4B-207ENST00000591519 OR6B1O95007 311 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 SCELO95171 688 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 INHBAP08476 426 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 ATP5A1P25705 553 aaKnown RBP9.64□□□□□ -0.87
VPS4B-207ENST00000591519 CERS1P27544 350 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 RFC3P40938 356 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 HK2P52789 917 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 KRTAP10-9P60411 292 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 GPR85P60893 370 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 RAB10P61026 200 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 PPIAP62937 165 aaKnown RBP9.64□□□□□ -0.87
VPS4B-207ENST00000591519 IRF9Q00978 393 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 BIKQ13323 160 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 NAB1Q13506 487 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 TESK1Q15569 626 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 OR4D1Q15615 310 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 PDK4Q16654 411 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 MPEG1Q2M385 716 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 TMEM35AQ53FP2 167 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 FBXO48Q5FWF7 155 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 PAGE2BQ5JRK9 111 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 NDUFAF5Q5TEU4 345 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 ADNP2Q6IQ32 1131 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 IL20RBQ6UXL0 311 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 ISCA2Q86U28 154 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 CD163Q86VB7 1156 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 LAS2Q8IYD9 372 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 ACOT4Q8N9L9 421 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 FAM47BQ8NA70 645 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 GOLM1Q8NBJ4 401 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 OR5L2Q8NGL0 311 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 OR14A16Q8NHC5 309 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 STAG3L4Q8TBR4 150 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 ZNF473Q8WTR7 871 aaKnown RBP9.64□□□□□ -0.87
VPS4B-207ENST00000591519 ASB15Q8WXK1 588 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 RND1Q92730 232 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 UBE2E3Q969T4 207 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 ESAMQ96AP7 390 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 CSF3RQ99062 836 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 CD244Q9BZW8 370 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 TP63Q9H3D4 680 aaPredicted RBP9.64□□□□□ -0.87
VPS4B-207ENST00000591519 LIN28AQ9H9Z2 209 aaKnown RBP9.64□□□□□ -0.87
VPS4B-207ENST00000591519 MCCC2Q9HCC0 563 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 HPF1Q9NWY4 346 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 WWOXQ9NZC7 414 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 ERVK-11Q9UQG0 969 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 IKBKGQ9Y6K9 419 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 PHF3Q92576 2039 aaKnown RBP9.64□□□□□ -0.87
VPS4B-207ENST00000591519 DNAJC13O75165 2243 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 F8P00451 2351 aa9.64□□□□□ -0.87
VPS4B-207ENST00000591519 HCFC1P51610 2035 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 EML6Q6ZMW3 1958 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 A0A087WUV0 522 aaPredicted RBP9.63□□□□□ -0.87
VPS4B-207ENST00000591519 EXOC1LA0A1B0GW35 172 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 PINLYPA6NC86 204 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 WWP2O00308 870 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 CDC40O60508 579 aaKnown RBP eCLIP9.63□□□□□ -0.87
VPS4B-207ENST00000591519 PDE9AO76083 593 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 TOXO94900 526 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 IGHG3P01860 377 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 IGHA1P01876 353 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 IFNA16P05015 189 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 HIST1H1TP22492 207 aaPredicted RBP9.63□□□□□ -0.87
VPS4B-207ENST00000591519 SERPINB1P30740 379 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 CHRNB4P30926 498 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 GPC1P35052 558 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 SOX3P41225 446 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 MSH2P43246 934 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 NR0B1P51843 470 aaKnown RBP9.63□□□□□ -0.87
VPS4B-207ENST00000591519 ARFIP1P53367 373 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 RNF4P78317 190 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 IGLV3-21P80748 117 aaPredicted RBP9.63□□□□□ -0.87
VPS4B-207ENST00000591519 IRF8Q02556 426 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 TFF3Q07654 80 aa9.63□□□□□ -0.87
VPS4B-207ENST00000591519 STX4Q12846 297 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms