RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 LGI4Q8N135 537 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 ARMC10Q8N2F6 343 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 METTL4Q8N3J2 472 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 CCNYL1Q8N7R7 359 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 AGAP11Q8TF27 550 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 SELENOMQ8WWX9 145 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 PPWD1Q96BP3 646 aaKnown RBP9.19□□□□□ -0.94
PTPN2-208ENST00000589216 VMP1Q96GC9 406 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 APOPT1Q96IL0 206 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 ZNF354BQ96LW1 612 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 SERPINI1Q99574 410 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 SLX1AQ9BQ83 275 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 CENPKQ9BS16 269 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 SLC29A3Q9BZD2 475 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 ACPTQ9BZG2 426 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 OR8D2Q9GZM6 311 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 RPF2Q9H7B2 306 aaKnown RBP9.19□□□□□ -0.94
PTPN2-208ENST00000589216 PPCSQ9HAB8 311 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 KLHL1Q9NR64 748 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 LYARQ9NX58 379 aaKnown RBP9.19□□□□□ -0.94
PTPN2-208ENST00000589216 MKS1Q9NXB0 559 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 SLC17A7Q9P2U7 560 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 VTI1BQ9UEU0 232 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 DCDC2Q9UHG0 476 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 LGALS13Q9UHV8 139 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 TEKT2Q9UIF3 430 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 PHF11Q9UIL8 331 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 SLC12A4Q9UP95 1085 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 TIMM22Q9Y584 194 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 MAST4O15021 2626 aa9.19□□□□□ -0.94
PTPN2-208ENST00000589216 DIDO1Q9BTC0 2240 aaKnown RBP9.19□□□□□ -0.94
PTPN2-208ENST00000589216 C17orf105B2RV13 164 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 COPEO14579 308 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 PGRMC2O15173 223 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 SEMA7AO75326 666 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 VPS4BO75351 444 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 CBX6O95503 412 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 KLK1P06870 262 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 MST1P26927 711 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 STT3AP46977 705 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 CLCN2P51788 898 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 ARFIP1P53367 373 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 NAGLUP54802 743 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 HMGCS1Q01581 520 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 DUSP2Q05923 314 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 RCN2Q14257 317 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 EIF2S3LQ2VIR3 472 aaKnown RBP9.18□□□□□ -0.94
PTPN2-208ENST00000589216 ZNF750Q32MQ0 723 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 ZNF766Q5HY98 468 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 ZNF324BQ6AW86 544 aaPredicted RBP9.18□□□□□ -0.94
PTPN2-208ENST00000589216 RPUSD3Q6P087 351 aaKnown RBP9.18□□□□□ -0.94
PTPN2-208ENST00000589216 CYP20A1Q6UW02 462 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 FRMD7Q6ZUT3 714 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 SLC22A9Q8IVM8 553 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 SRRM1Q8IYB3 904 aaKnown RBP9.18□□□□□ -0.94
PTPN2-208ENST00000589216 MREGQ8N565 214 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 C1orf52Q8N6N3 182 aaKnown RBP9.18□□□□□ -0.94
PTPN2-208ENST00000589216 BANPQ8N9N5 519 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 OR14A16Q8NHC5 309 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 SLC2A12Q8TD20 617 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 ZNF721Q8TF20 911 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 FAR1Q8WVX9 515 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 UTP23Q9BRU9 249 aaKnown RBP9.18□□□□□ -0.94
PTPN2-208ENST00000589216 MECRQ9BV79 373 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 PARD6BQ9BYG5 372 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 DEFB126Q9BYW3 111 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 SHCBP1LQ9BZQ2 653 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 MID1IP1Q9NPA3 183 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 PSD3Q9NYI0 1048 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 UNC79Q9P2D8 2635 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 VPS4AQ9UN37 437 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 PTGDR2Q9Y5Y4 395 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 SPACA6W5XKT8 324 aa9.18□□□□□ -0.94
PTPN2-208ENST00000589216 CENPEQ02224 2701 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 SPAG7O75391 227 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 ITGA10O75578 1167 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 ESRRBO95718 433 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 CLPSP04118 112 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 IGKV3-11P04433 115 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 ALOX15P16050 662 aaPredicted RBP9.17□□□□□ -0.94
PTPN2-208ENST00000589216 HMOX2P30519 316 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 BUD31P41223 144 aaPredicted RBP9.17□□□□□ -0.94
PTPN2-208ENST00000589216 HK2P52789 917 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 ERVK-8P63133 956 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 RAE1P78406 368 aaKnown RBP9.17□□□□□ -0.94
PTPN2-208ENST00000589216 PLIN5Q00G26 463 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 OC90Q02509 493 aaPredicted RBP9.17□□□□□ -0.94
PTPN2-208ENST00000589216 ZNF844Q08AG5 666 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 CSTF3Q12996 717 aaKnown RBP9.17□□□□□ -0.94
PTPN2-208ENST00000589216 SERTAD2Q14140 314 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 INAQ16352 499 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 CCDC153Q494R4 210 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 C10orf62Q5T681 223 aaPredicted RBP9.17□□□□□ -0.94
PTPN2-208ENST00000589216 NDUFAF5Q5TEU4 345 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 OR52E8Q6IFG1 317 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 FAM180BQ6P0A1 224 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 FAM180AQ6UWF9 173 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 GALNTL5Q7Z4T8 443 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 C10orf107Q8IVU9 208 aa9.17□□□□□ -0.94
PTPN2-208ENST00000589216 C9orf40Q8IXQ3 194 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms