RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 RDH16O75452 317 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 SKAP2O75563 359 aaPredicted RBP11.62□□□□□ -0.55
ERCC2-207ENST00000586441 JRKO75564 520 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 ZNF888P0CJ79 500 aaPredicted RBP11.62□□□□□ -0.55
ERCC2-207ENST00000586441 RNH1P13489 461 aaKnown RBP11.62□□□□□ -0.55
ERCC2-207ENST00000586441 SERPINB1P30740 379 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 CPOXP36551 454 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 EFNA3P52797 238 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 STX1BP61266 288 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 CUL3Q13618 768 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 ZNF169Q14929 603 aaPredicted RBP11.62□□□□□ -0.55
ERCC2-207ENST00000586441 PCBP2Q15366 365 aaKnown RBP eCLIP11.62□□□□□ -0.558e-8■■■■■ 32.6
ERCC2-207ENST00000586441 NSDHLQ15738 373 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 MINDY4Q4G0A6 757 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 KANK2Q63ZY3 851 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 LRRC70Q7Z2Q7 622 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 ANKRD37Q7Z713 158 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 SRFBP1Q8NEF9 429 aaKnown RBP11.62□□□□□ -0.55
ERCC2-207ENST00000586441 ZCCHC10Q8TBK6 192 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 ADAMTS18Q8TE60 1221 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 TRPC4APQ8TEL6 797 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 STMN2Q93045 179 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 UBE2E3Q969T4 207 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 C19orf60Q96EN9 201 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 LPAR4Q99677 370 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 THTPAQ9BU02 230 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 SPNS1Q9H2V7 528 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 DENND2DQ9H6A0 471 aaPredicted RBP11.62□□□□□ -0.55
ERCC2-207ENST00000586441 RNPEPL1Q9HAU8 725 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 ZBTB26Q9HCK0 441 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 MMP25Q9NPA2 562 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 HCN3Q9P1Z3 774 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 ADGRE2Q9UHX3 823 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 PRPF19Q9UMS4 504 aaKnown RBP11.62□□□□□ -0.55
ERCC2-207ENST00000586441 TSC22D4Q9Y3Q8 395 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 PCDHGB6Q9Y5F9 930 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 DOPEY2Q9Y3R5 2298 aa11.62□□□□□ -0.55
ERCC2-207ENST00000586441 SETXQ7Z333 2677 aaKnown RBP11.62□□□□□ -0.55
ERCC2-207ENST00000586441 TRAV17A0A0B4J275 112 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 NCF1BA6NI72 391 aaPredicted RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 NCF1CA8MVU1 366 aaPredicted RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 TMEM233B4DJY2 109 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 UBFD1O14562 309 aaKnown RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 SIX3O95343 332 aaPredicted RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 STATHP02808 62 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 SERPIND1P05546 499 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 UROSP10746 265 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 NCF1P14598 390 aaPredicted RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 TNFSF10P50591 281 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ARFIP1P53367 373 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 CDH13P55290 713 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 EEF1A2Q05639 463 aaKnown RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 TGM3Q08188 693 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 STX5Q13190 355 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 SLBPQ14493 270 aaKnown RBP eCLIP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ABRAXAS2Q15018 415 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 HIST2H2ACQ16777 129 aaPredicted RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 COLEC12Q5KU26 742 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 MFSD4BQ5TF39 518 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ABHD17BQ5VST6 288 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 HIST2H2AA3Q6FI13 130 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 FAAH2Q6GMR7 532 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ULK2Q8IYT8 1036 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 CISD2Q8N5K1 135 aaKnown RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 POU5F2Q8N7G0 328 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 OR2L5Q8NG80 312 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 BRIX1Q8TDN6 353 aaKnown RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 AGAP11Q8TF27 550 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 UBTD2Q8WUN7 234 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 MS4A6EQ96DS6 147 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 PEX11GQ96HA9 241 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 PPP1R36Q96LQ0 422 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ZNF354BQ96LW1 612 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ZNF382Q96SR6 550 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 SERPINI1Q99574 410 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 MESP1Q9BRJ9 268 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ROGDIQ9GZN7 287 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 EFCAB1Q9HAE3 211 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 PRDM9Q9NQV7 894 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ASF1BQ9NVP2 202 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 STMN3Q9NZ72 180 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 NOP53Q9NZM5 478 aaKnown RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 PCTPQ9UKL6 214 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 ZNF490Q9ULM2 529 aaPredicted RBP11.61□□□□□ -0.55
ERCC2-207ENST00000586441 FIS1Q9Y3D6 152 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 MMACHCQ9Y4U1 282 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 HIVEP3Q5T1R4 2406 aa11.61□□□□□ -0.55
ERCC2-207ENST00000586441 IGKV3D-11A0A0A0MRZ8 115 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 LOC100653049A0A140TA62 436 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 K7EPI3 171 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 PSMD12O00232 456 aaPredicted RBP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 CLDN4O14493 209 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 CCNT2O60583 730 aaKnown RBP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 PRMT3O60678 531 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 UGDHO60701 494 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 PEX11AO75192 247 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 KRT34O76011 436 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 ZIC2O95409 532 aaPredicted RBP11.6□□□□□ -0.55
ERCC2-207ENST00000586441 ESRRBO95718 433 aa11.6□□□□□ -0.55
ERCC2-207ENST00000586441 JUNP05412 331 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms