RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ST13P5Q8NFI4 369 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TMEM80Q96HE8 168 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TMEM19Q96HH6 336 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CNPPD1Q9BV87 410 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CFHR5Q9BXR6 569 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RACGAP1Q9H0H5 632 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MOV10Q9HCE1 1003 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SMURF1Q9HCE7 757 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 DYRK4Q9NR20 520 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 C14orf119Q9NWQ9 140 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 KLHL3Q9UH77 587 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CLEC2DQ9UHP7 191 aa13.5□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NINQ8N4C6 2090 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CSO75390 466 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 FGF18O76093 207 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SOX14O95416 240 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ACADLP28330 430 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SOX3P41225 446 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SPHARQ15513 63 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CLPPQ16740 277 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PRAMEF14Q5SWL7 426 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 DCST1Q5T197 706 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PRAMEF13Q5VWM6 474 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 C12orf73Q69YU5 71 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SPATC1Q76KD6 591 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF547Q8IVP9 402 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ADGRF3Q8IZF5 1079 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OR5P2Q8WZ92 322 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PPP1R16AQ96I34 528 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 AGAP4Q96P64 663 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF717Q9BY31 904 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 BARHL1Q9BZE3 327 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SAGE1Q9NXZ1 904 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 AHSPQ9NZD4 102 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 DNAJC27Q9NZQ0 273 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TBC1D14Q9P2M4 693 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 C17orf113A0A1B0GUU1 675 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ANKDD1BA6NHY2 528 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 H3BQ06 376 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 FAAHO00519 579 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PLPP1O14494 284 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SPINT1O43278 529 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SSX4O60224 188 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OR10H3O60404 316 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SLITRK5O94991 958 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TBX6O95947 436 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 IGFBP1P08833 259 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CKMT1AP12532 417 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TLE2Q04725 743 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 LRRC26Q2I0M4 334 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SLC34A3Q8N130 599 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 KRT78Q8N1N4 520 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 LINC00615Q96LM1 132 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SLC6A18Q96N87 628 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OR2A14Q96R47 310 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 DPEP2Q9H4A9 486 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SIAEQ9HAT2 523 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 EXOSC4Q9NPD3 245 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NPAP1Q9NZP6 1156 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TBC1D24Q9ULP9 559 aa13.49□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 KIAA1549LQ6ZVL6 1849 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ABHD14A-ACY1A0A1B0GW23 586 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TBX19O60806 448 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MOSPD3O75425 235 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 H1F0P07305 194 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ADH1AP07327 375 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PSMA1P25786 263 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 DDX6P26196 483 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 WEE1P30291 646 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OPRD1P41143 372 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CRYBB2P43320 205 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 XKP51811 444 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NKX2-5P52952 324 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MANFP55145 182 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SF3B4Q15427 424 aaKnown RBP eCLIP13.48□□□□□ -0.252e-8■■■■□ 19.3
CDK5RAP3-237ENST00000585163 RNLSQ5VYX0 342 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 LCTLQ6UWM7 567 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CASP12Q6UXS9 341 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TMC5Q6UXY8 1006 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NATD1Q8N6N6 113 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 IL17RCQ8NAC3 791 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 GALNT6Q8NCL4 622 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OR8J1Q8NGP2 316 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 VANGL1Q8TAA9 524 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SETD6Q8TBK2 473 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TMCO6Q96DC7 493 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MND1Q9BWT6 205 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZDHHC5Q9C0B5 715 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NEUROD4Q9HD90 331 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SEC14L4Q9UDX3 406 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ACAD8Q9UKU7 415 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 WBP11Q9Y2W2 641 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RPL36Q9Y3U8 105 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SNX11Q9Y5W9 270 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 H3BN98 237 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CACNB4O00305 520 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 KPNA3O00505 521 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MMP20O60882 483 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms