RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 NPIPA5E9PKD4 350 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 PROM1O43490 865 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 FGF17O60258 216 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 OR10H2O60403 315 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 SEMA3DO95025 777 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 FAM58BPP0C7Q3 252 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 NR2F6P10588 404 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 ZNF24P17028 368 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 BSGP35613 385 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 STT3AP46977 705 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 SLC29A2Q14542 456 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 OR4N5Q8IXE1 308 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 GPR137Q96N19 417 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 FRMD6Q96NE9 622 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 NSUN5Q96P11 429 aaKnown RBP11.51□□□□□ -0.57
SS18-225ENST00000585121 DDX31Q9H8H2 851 aaKnown RBP11.51□□□□□ -0.57
SS18-225ENST00000585121 NMRK1Q9NWW6 199 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 MYOTQ9UBF9 498 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 FETUBQ9UGM5 382 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 ZNF223Q9UK11 482 aaPredicted RBP11.51□□□□□ -0.57
SS18-225ENST00000585121 NPIPA1Q9UND3 350 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 SNX6Q9UNH7 406 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 ATG4BQ9Y4P1 393 aa11.51□□□□□ -0.57
SS18-225ENST00000585121 NBPF19A0A087WUL8 3843 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 A0A0A6YYD5 115 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 A8MT66 165 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 PEX1O43933 1283 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 EEDO75530 441 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 OR2J2O76002 312 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 GPR75O95800 540 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 RPS17P08708 135 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 FAM153BP0C7A2 387 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 ALOX15P16050 662 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 MEOX1P50221 254 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 HNRNPH2P55795 449 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 RNF4P78317 190 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 IGLV3-21P80748 117 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 FOLH1Q04609 750 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 TRAF3Q13114 568 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 FAM153CQ494X1 144 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 GGTA1PQ4G0N0 100 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 SGO1Q5FBB7 561 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 C18orf63Q68DL7 685 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 MRM1Q6IN84 353 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 SLC22A9Q8IVM8 553 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 GHDCQ8N2G8 530 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 CPSF7Q8N684 471 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 EIF1ADQ8N9N8 165 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 OR4F6Q8NGB9 312 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 ACMSDQ8TDX5 336 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 ZNF483Q8TF39 744 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 TSPAN10Q9H1Z9 355 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 DIDO1Q9BTC0 2240 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 WWP2O00308 870 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 CCL21O00585 134 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 TFECO14948 347 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 ASNA1O43681 348 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 PRKNO60260 465 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 SLC19A2O60779 497 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 GUCY1B2O75343 617 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 SUPT7LO94864 414 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 GSTA1P08263 222 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 ESRRAP11474 423 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 GCAP28676 217 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 CA7P43166 264 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 HK2P52789 917 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 HERVK_113P63132 956 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 C6orf163Q5TEZ5 329 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 OPN5Q6U736 354 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 IL20RBQ6UXL0 311 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 SULF2Q8IWU5 870 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 ST13P4Q8IZP2 240 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 TRPC4APQ8TEL6 797 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 SELENOMQ8WWX9 145 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 PPWD1Q96BP3 646 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 SENP5Q96HI0 755 aaPredicted RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 C1QTNF3Q9BXJ4 246 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 ERVK-6Q9BXR3 956 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 LIN28AQ9H9Z2 209 aaKnown RBP11.5□□□□□ -0.57
SS18-225ENST00000585121 ZBTB26Q9HCK0 441 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 TRPS1Q9UHF7 1281 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 SH3BGRL2Q9UJC5 107 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 ADAM29Q9UKF5 820 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 SLC12A4Q9UP95 1085 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 ASB4Q9Y574 426 aa11.5□□□□□ -0.57
SS18-225ENST00000585121 GLOD5A6NK44 160 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 TMPRSS11DO60235 418 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 ZG16O60844 167 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 ETHE1O95571 254 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 CLDN1O95832 211 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 KLK1P06870 262 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 ABOP16442 354 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 ATP5F1P24539 256 aaPredicted RBP11.49□□□□□ -0.57
SS18-225ENST00000585121 PIK3R1P27986 724 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 CDH13P55290 713 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 CLCQ05315 142 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 RASA2Q15283 850 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 CCNYL2Q5T2Q4 361 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 OR52E8Q6IFG1 317 aa11.49□□□□□ -0.57
SS18-225ENST00000585121 BNC2Q6ZN30 1099 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms