RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 AGKQ53H12 422 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 DTX1Q86Y01 620 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 ENDOVQ8N8Q3 282 aaKnown RBP17.22■□□□□ 0.35
RFFL-211ENST00000584541 TMEM52Q8NDY8 209 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 EXOSC8Q96B26 276 aaKnown RBP17.22■□□□□ 0.35
RFFL-211ENST00000584541 PTCHD1Q96NR3 888 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 CRB3Q9BUF7 120 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 CCDC167Q9P0B6 97 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 KCND3Q9UK17 655 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 EXO1Q9UQ84 846 aaKnown RBP17.22■□□□□ 0.35
RFFL-211ENST00000584541 FARSAQ9Y285 508 aaKnown RBP17.22■□□□□ 0.35
RFFL-211ENST00000584541 PTRH2Q9Y3E5 179 aaKnown RBP17.22■□□□□ 0.35
RFFL-211ENST00000584541 CAPN7Q9Y6W3 813 aa17.22■□□□□ 0.35
RFFL-211ENST00000584541 LDB3O75112 727 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 GPR75O95800 540 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 IL6P05231 212 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 S100A3P33764 101 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 POLR2JP52435 117 aaKnown RBP17.21■□□□□ 0.35
RFFL-211ENST00000584541 EMP2P54851 167 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 BTG2P78543 158 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 FOLH1Q04609 750 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 SERTAD2Q14140 314 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 UBAP2LQ14157 1087 aaKnown RBP17.21■□□□□ 0.35
RFFL-211ENST00000584541 MAPRE2Q15555 327 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 UGT8Q16880 541 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 ANKRD26P1Q6NSI1 321 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 SHISA6Q6ZSJ9 500 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 CAMKMTQ7Z624 323 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 SHISA5Q8N114 240 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 OR7A2PQ8NGA2 310 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 OR9I1Q8NGQ6 314 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 METTL21AQ8WXB1 218 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 UCN3Q969E3 161 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 TEX37Q96LM6 180 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 SPSB2Q99619 263 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 EFHD1Q9BUP0 239 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 BHLHE41Q9C0J9 482 aaPredicted RBP17.21■□□□□ 0.35
RFFL-211ENST00000584541 VN1R1Q9GZP7 353 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 SLC35C2Q9NQQ7 365 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 WDR70Q9NW82 654 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 TAS2R7Q9NYW3 318 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 C5AR2Q9P296 337 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 C3orf18Q9UK00 162 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 ANGPTL2Q9UKU9 493 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 CES1P1Q9UKY3 287 aa17.21■□□□□ 0.35
RFFL-211ENST00000584541 LOC101059948A0A1B0GTJ6 334 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 IDSB3KWA1 339 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 NR5A2O00482 541 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 PDPK1O15530 556 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 FGF17O60258 216 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 CNOT3O75175 753 aaKnown RBP17.2■□□□□ 0.34
RFFL-211ENST00000584541 IGHEP01854 428 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 CSNK2A2P19784 350 aaPredicted RBP17.2■□□□□ 0.34
RFFL-211ENST00000584541 PTPN4P29074 926 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 NTSP30990 170 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 KIR3DL1P43629 444 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 RHAGQ02094 409 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 KLF10Q13118 480 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 FAM174BQ3ZCQ3 159 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 LAPTM4BQ86VI4 370 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 SCUBE1Q8IWY4 988 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 OR4N5Q8IXE1 308 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 PLPP5Q8NEB5 264 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 VPS37AQ8NEZ2 397 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 OR2Y1Q8NGV0 311 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 FGF11Q92914 225 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 COQ8BQ96D53 544 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 SLC45A3Q96JT2 553 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 BBS4Q96RK4 519 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 PELOQ9BRX2 385 aaKnown RBP17.2■□□□□ 0.34
RFFL-211ENST00000584541 DUSP26Q9BV47 211 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 GPN2Q9H9Y4 310 aaPredicted RBP17.2■□□□□ 0.34
RFFL-211ENST00000584541 ARMCX1Q9P291 453 aa17.2■□□□□ 0.34
RFFL-211ENST00000584541 DYTNA2CJ06 578 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 WASHC1A8K0Z3 465 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 PCDH17O14917 1159 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 MAOAP21397 527 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 IL12AP29459 219 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 XKP51811 444 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 NSDHLQ15738 373 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 SPANXN4Q5MJ08 99 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 ANXA8L1Q5VT79 327 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 BLOC1S3Q6QNY0 202 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 OR8J2Q8NGG1 315 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 ZFP28Q8NHY6 868 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 ANKRD9Q96BM1 317 aaPredicted RBP17.19■□□□□ 0.34
RFFL-211ENST00000584541 ZBED6CLQ96FA7 236 aaPredicted RBP17.19■□□□□ 0.34
RFFL-211ENST00000584541 ALOXE3Q9BYJ1 711 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 MYLK2Q9H1R3 596 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 SEMA3GQ9NS98 782 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 C19orf25Q9UFG5 118 aaPredicted RBP17.19■□□□□ 0.34
RFFL-211ENST00000584541 TCFL5Q9UL49 500 aa17.19■□□□□ 0.34
RFFL-211ENST00000584541 CCDC154A6NI56 674 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 C9JVG2 144 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 CFLARO15519 480 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 OR10H2O60403 315 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 ALOX12BO75342 701 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 KLF7O75840 302 aaPredicted RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 RECKO95980 971 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 IFNA16P05015 189 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms