RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 DIDO1Q9BTC0 2240 aaKnown RBP19■□□□□ 0.63
SS18-224ENST00000584083 A0A1B0GTL3 188 aa19■□□□□ 0.63
SS18-224ENST00000584083 A0A1W2PR48 441 aa19■□□□□ 0.63
SS18-224ENST00000584083 GLOD5A6NK44 160 aa19■□□□□ 0.63
SS18-224ENST00000584083 DYRK3O43781 588 aa19■□□□□ 0.63
SS18-224ENST00000584083 PRKNO60260 465 aaPredicted RBP19■□□□□ 0.63
SS18-224ENST00000584083 OR4F21O95013 312 aa19■□□□□ 0.63
SS18-224ENST00000584083 UNC5CO95185 931 aa19■□□□□ 0.63
SS18-224ENST00000584083 NR2F6P10588 404 aa19■□□□□ 0.63
SS18-224ENST00000584083 KRT15P19012 456 aa19■□□□□ 0.63
SS18-224ENST00000584083 STT3AP46977 705 aa19■□□□□ 0.63
SS18-224ENST00000584083 SSR4P51571 173 aa19■□□□□ 0.63
SS18-224ENST00000584083 BIKQ13323 160 aa19■□□□□ 0.63
SS18-224ENST00000584083 ZNF678Q5SXM1 525 aa19■□□□□ 0.63
SS18-224ENST00000584083 C16orf47Q6ZP98 133 aaPredicted RBP19■□□□□ 0.63
SS18-224ENST00000584083 PNPLA5Q7Z6Z6 429 aaPredicted RBP19■□□□□ 0.63
SS18-224ENST00000584083 SLC22A9Q8IVM8 553 aa19■□□□□ 0.63
SS18-224ENST00000584083 ZNF321PQ8N8H1 164 aa19■□□□□ 0.63
SS18-224ENST00000584083 MYRIPQ8NFW9 859 aa19■□□□□ 0.63
SS18-224ENST00000584083 SLC2A12Q8TD20 617 aa19■□□□□ 0.63
SS18-224ENST00000584083 SELENOMQ8WWX9 145 aa19■□□□□ 0.63
SS18-224ENST00000584083 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19■□□□□ 0.636e-8■■■■□ 26.7
SS18-224ENST00000584083 PPWD1Q96BP3 646 aaKnown RBP19■□□□□ 0.63
SS18-224ENST00000584083 TMEM237Q96Q45 408 aa19■□□□□ 0.63
SS18-224ENST00000584083 MRPL1Q9BYD6 325 aaKnown RBP19■□□□□ 0.63
SS18-224ENST00000584083 TRIM45Q9H8W5 580 aaPredicted RBP19■□□□□ 0.63
SS18-224ENST00000584083 FARSBQ9NSD9 589 aaKnown RBP19■□□□□ 0.63
SS18-224ENST00000584083 COPS7AQ9UBW8 275 aa19■□□□□ 0.63
SS18-224ENST00000584083 SLC12A4Q9UP95 1085 aa19■□□□□ 0.63
SS18-224ENST00000584083 YARS2Q9Y2Z4 477 aaKnown RBP19■□□□□ 0.63
SS18-224ENST00000584083 USP9YO00507 2555 aaPredicted RBP19■□□□□ 0.63
SS18-224ENST00000584083 ARHGAP10A1A4S6 786 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 FOXO6A8MYZ6 492 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 NME2P1O60361 137 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 PDYNP01213 254 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 KLK1P06870 262 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 RNF224P0DH78 156 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 ALOX15P16050 662 aaPredicted RBP18.99■□□□□ 0.63
SS18-224ENST00000584083 IMPDH1P20839 514 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 NME2P22392 152 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 IGLV3-21P80748 117 aaPredicted RBP18.99■□□□□ 0.63
SS18-224ENST00000584083 PLIN5Q00G26 463 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 ALDH6A1Q02252 535 aaKnown RBP18.99■□□□□ 0.63
SS18-224ENST00000584083 PAGE2Q7Z2X7 111 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 ZNF227Q86WZ6 799 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 CYP4Z2PQ8N1L4 340 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 ANKZF1Q9H8Y5 726 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 PPCSQ9HAB8 311 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 MYOTQ9UBF9 498 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 TRPS1Q9UHF7 1281 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 ERVK-11Q9UQG0 969 aa18.99■□□□□ 0.63
SS18-224ENST00000584083 SPTAN1Q13813 2472 aaKnown RBP18.99■□□□□ 0.63
SS18-224ENST00000584083 WASHC1A8K0Z3 465 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 WWP2O00308 870 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 LRRTM2O43300 516 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 OR10H2O60403 315 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 GLRA3O75311 464 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 OR2J2O76002 312 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 GPR75O95800 540 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 MLYCDO95822 493 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 AIFM1O95831 613 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 GP1BBP13224 206 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 PRKAA2P54646 552 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 RASA2Q15283 850 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 C4orf17Q53FE4 359 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 CCNYL2Q5T2Q4 361 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 GPRIN3Q6ZVF9 776 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 CDYL2Q8N8U2 506 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 ASB15Q8WXK1 588 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 SENP5Q96HI0 755 aaPredicted RBP18.98■□□□□ 0.63
SS18-224ENST00000584083 FRMD6Q96NE9 622 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 NMRK1Q9NWW6 199 aa18.98■□□□□ 0.63
SS18-224ENST00000584083 KLF13Q9Y2Y9 288 aaPredicted RBP18.98■□□□□ 0.63
SS18-224ENST00000584083 ASPDHA6ND91 283 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 TMEM200CA6NKL6 621 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 LDLRP01130 860 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 KRT6AP02538 564 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 KRT6BP04259 564 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 KRT6CP48668 564 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 HK2P52789 917 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 PER3P56645 1201 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 RNF4P78317 190 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 OR52E8Q6IFG1 317 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 TDRPQ86YL5 185 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 ST13P4Q8IZP2 240 aaPredicted RBP18.97■□□□□ 0.63
SS18-224ENST00000584083 METTL4Q8N3J2 472 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 OR5L2Q8NGL0 311 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 EPS8L3Q8TE67 593 aaKnown RBP18.97■□□□□ 0.63
SS18-224ENST00000584083 DOK4Q8TEW6 326 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 ZNF721Q8TF20 911 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 UCN3Q969E3 161 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 ART5Q96L15 291 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 ZNF382Q96SR6 550 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 HBEGFQ99075 208 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 PELOQ9BRX2 385 aaKnown RBP18.97■□□□□ 0.63
SS18-224ENST00000584083 TSPAN10Q9H1Z9 355 aaPredicted RBP18.97■□□□□ 0.63
SS18-224ENST00000584083 BRF2Q9HAW0 419 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 TEX10Q9NXF1 929 aaPredicted RBP18.97■□□□□ 0.63
SS18-224ENST00000584083 ZNF225Q9UK10 706 aa18.97■□□□□ 0.63
SS18-224ENST00000584083 ADAM29Q9UKF5 820 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms