RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	ESAM	Q96AP7	390 aa		3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	RCHY1	Q96PM5	261 aa		3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	RAB40C	Q96S21	281 aa		3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	LRRCC1	Q9C099	1032 aa		3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	ABCG4	Q9H172	646 aa		3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	GAN	Q9H2C0	597 aa		3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	GDF3	Q9NR23	364 aa		3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	DDX28	Q9NUL7	540 aa	Known RBP	3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	MGAT4A	Q9UM21	535 aa		3.57	□□□□□ -1.84
NUP85-222	ENST00000583569	TRBV5-4	A0A0C4DH59	114 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	ZNF724	A8MTY0	619 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569		K7EQG2	157 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	BAG2	O95816	211 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	SFTPB	P07988	381 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	MMP10	P09238	476 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	VDR	P11473	427 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	ETV5	P41161	510 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	RPL27	P61353	136 aa	Known RBP	3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	HSPA14	Q0VDF9	509 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	AP1B1	Q10567	949 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	CBX3	Q13185	183 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	RIG	Q13278	110 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	SLC17A1	Q14916	467 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	SIX1	Q15475	284 aa	Predicted RBP	3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	HFE	Q30201	348 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	SLC10A5	Q5PT55	438 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	FAM182A	Q5T1J6	154 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	DCAF12	Q5T6F0	453 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	ZNF841	Q6ZN19	808 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	RPAIN	Q86UA6	219 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	WDR49	Q8IV35	697 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	PHC2	Q8IXK0	858 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	GVQW1	Q8N7I0	195 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	ICA1L	Q8NDH6	482 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	OR1B1	Q8NGR6	318 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	MGARP	Q8TDB4	240 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	EEF2KMT	Q96G04	330 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	ZNF577	Q9BSK1	485 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	TRIM6	Q9C030	488 aa	Predicted RBP	3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	SLC26A1	Q9H2B4	701 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	CXXC4	Q9H2H0	198 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	LIME1	Q9H400	295 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	ACOXL	Q9NUZ1	547 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	TECR	Q9NZ01	308 aa	Known RBP	3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	AKAP7	Q9P0M2	348 aa	Predicted RBP	3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	CACNA1F	O60840	1977 aa		3.56	□□□□□ -1.84
NUP85-222	ENST00000583569	SH3PXD2B	A1X283	911 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	HSF2BP	O75031	334 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	DUSP11	O75319	330 aa	Known RBP	3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	OR6B1	O95007	311 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	TXNDC12	O95881	172 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	OLFM2	O95897	454 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	MBL2	P11226	248 aa	Predicted RBP	3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	AREG	P15514	252 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	ACADS	P16219	412 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	ZNF18	P17022	549 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	CAPN2	P17655	700 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	LMO2	P25791	158 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	SHC1	P29353	583 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	SLC1A4	P43007	532 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	NSF	P46459	744 aa	Known RBP	3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	HERV-K104	P63124	156 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	ACY1	Q03154	408 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	P2RY14	Q15391	338 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	POM121L1P	Q3SYA9	428 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	MPPE1	Q53F39	396 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	RTL6	Q6ICC9	239 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	ETFRF1	Q6IPR1	90 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569		Q6ZRG5	221 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	SLC47A2	Q86VL8	602 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	PEX5L	Q8IYB4	626 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	PARP8	Q8N3A8	854 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	C4orf32	Q8N8J7	132 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	C17orf47	Q8NEP4	570 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	OR2L2	Q8NH16	312 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	FAM222B	Q8WU58	562 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	MRPL53	Q96EL3	112 aa	Known RBP	3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	CDHR1	Q96JP9	859 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	ZNF560	Q96MR9	790 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	PSMB7	Q99436	277 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	NAP1L3	Q99457	506 aa	Predicted RBP	3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	SPAG8	Q99932	426 aa	Predicted RBP	3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	FUNDC2	Q9BWH2	189 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	RBM24	Q9BX46	236 aa	Known RBP	3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	CYP39A1	Q9NYL5	469 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	HMG20B	Q9P0W2	317 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	RARRES3	Q9UL19	164 aa		3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	TDRKH	Q9Y2W6	561 aa	Known RBP	3.55	□□□□□ -1.84
NUP85-222	ENST00000583569	SALL1	Q9NSC2	1324 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569		A0A1W2PPR1	153 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	ACOD1	A6NK06	481 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	YJEFN3	A6XGL0	299 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	SHISA9	B4DS77	424 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	EEF2K	O00418	725 aa	Known RBP	3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	VEGFD	O43915	354 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	ALDH3B1	P43353	468 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	MTIF2	P46199	727 aa	Known RBP	3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	NT5C2	P49902	561 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	SLC8A3	P57103	927 aa		3.54	□□□□□ -1.84
NUP85-222	ENST00000583569	PPP1R8	Q12972	351 aa	Known RBP	3.54	□□□□□ -1.84

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