RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 FAM46CQ5VWP2 391 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 ARMCX5Q6P1M9 558 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 TMEM64Q6YI46 380 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 C17orf107Q6ZR85 190 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 ADCK2Q7Z695 626 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 CCAR2Q8N163 923 aaKnown RBP2.88□□□□□ -1.95
COPS3-217ENST00000583160 SMPDL3AQ92484 453 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 VPS33AQ96AX1 596 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 UBA5Q9GZZ9 404 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 RABEP2Q9H5N1 569 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 PDFQ9HBH1 243 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 SH3GLB2Q9NR46 395 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 ARMCX1Q9P291 453 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 CCL27Q9Y4X3 112 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 PCDHGA1Q9Y5H4 931 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 LRP6O75581 1613 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 COL4A4P53420 1690 aaPredicted RBP2.88□□□□□ -1.95
COPS3-217ENST00000583160 RPGRIP1LQ68CZ1 1315 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 ASXL1Q8IXJ9 1541 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 NALCNQ8IZF0 1738 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 IFT172Q9UG01 1749 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 MARF1Q9Y4F3 1742 aaKnown RBP2.88□□□□□ -1.95
COPS3-217ENST00000583160 CLTCL1P53675 1640 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 ANXA2P2A6NMY6 339 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 CCDC188H7C350 402 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 FCGR3BO75015 233 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 FGF19O95750 216 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 PIGRP01833 764 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 CCDC175P0C221 793 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 LBPP18428 481 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 RAD52P43351 418 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 CRKLP46109 303 aaKnown RBP2.87□□□□□ -1.95
COPS3-217ENST00000583160 HLCSP50747 726 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 RASA2Q15283 850 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 TTC31Q49AM3 519 aaPredicted RBP2.87□□□□□ -1.95
COPS3-217ENST00000583160 RFTN2Q52LD8 501 aaPredicted RBP2.87□□□□□ -1.95
COPS3-217ENST00000583160 KLHL10Q6JEL2 608 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 RFWD3Q6PCD5 774 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 PAMR1Q6UXH9 720 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 ERN2Q76MJ5 926 aaKnown RBP2.87□□□□□ -1.95
COPS3-217ENST00000583160 NUFIP2Q7Z417 695 aaKnown RBP2.87□□□□□ -1.95
COPS3-217ENST00000583160 PRR22Q8IZ63 422 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 SLC43A2Q8N370 569 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 IQUBQ8NA54 791 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 FLVCR1-AS1Q8TAF5 88 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 HEXDCQ8WVB3 486 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 PHYHIPLQ96FC7 376 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 RANBP9Q96S59 729 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 TXLNGYQ9BZA5 131 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 LIME1Q9H400 295 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 NMUR1Q9HB89 426 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 Q9UF83 564 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 HBS1LQ9Y450 684 aaKnown RBP2.87□□□□□ -1.95
COPS3-217ENST00000583160 KNDC1Q76NI1 1749 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.87□□□□□ -1.95
COPS3-217ENST00000583160 NUP155O75694 1391 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 METP08581 1390 aa2.87□□□□□ -1.95
COPS3-217ENST00000583160 HFM1A2PYH4 1435 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 NAIPQ13075 1403 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 TRAV9-2A0A087WT02 112 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 H0Y9J4 135 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 KRT6AP02538 564 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 KRT6BP04259 564 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 ANKRD34CP0C6C1 535 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 SLC1A6P48664 564 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 KRT6CP48668 564 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 IST1P53990 364 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 ADARP55265 1226 aaKnown RBP2.86□□□□□ -1.95
COPS3-217ENST00000583160 PCK2Q16822 640 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 SPOUT1Q5T280 376 aaKnown RBP2.86□□□□□ -1.95
COPS3-217ENST00000583160 ZNF770Q6IQ21 691 aaPredicted RBP2.86□□□□□ -1.95
COPS3-217ENST00000583160 NEPROQ6NW34 567 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 RPUSD3Q6P087 351 aaKnown RBP2.86□□□□□ -1.95
COPS3-217ENST00000583160 KRT74Q7RTS7 529 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 DNAJB7Q7Z6W7 309 aaPredicted RBP2.86□□□□□ -1.95
COPS3-217ENST00000583160 VASH2Q86V25 355 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 ZNRF1Q8ND25 227 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 OR6F1Q8NGZ6 308 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 OCC1Q8TAD7 63 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 SLC35C1Q96A29 364 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 UBE2TQ9NPD8 197 aaPredicted RBP2.86□□□□□ -1.95
COPS3-217ENST00000583160 SH3GLB1Q9Y371 365 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 FBXO7Q9Y3I1 522 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 CDC42BPGQ6DT37 1551 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 PNPLA6Q8IY17 1366 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 ABCC11Q96J66 1382 aa2.86□□□□□ -1.95
COPS3-217ENST00000583160 SPATA31E1Q6ZUB1 1445 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 MYOM2P54296 1465 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 C1orf167Q5SNV9 1468 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 NRXN1Q9ULB1 1477 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 FOXI3A8MTJ6 420 aaPredicted RBP2.85□□□□□ -1.95
COPS3-217ENST00000583160 CDX4O14627 284 aaPredicted RBP2.85□□□□□ -1.95
COPS3-217ENST00000583160 P2RX6O15547 441 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 FRAT2O75474 233 aaPredicted RBP2.85□□□□□ -1.95
COPS3-217ENST00000583160 KRT3P12035 628 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 PDGFRAP16234 1089 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 BRCC3P46736 316 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 PTENP60484 403 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 ABRQ12979 859 aa2.85□□□□□ -1.95
COPS3-217ENST00000583160 ARMCX4Q5H9R4 360 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms