RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 TCRBV7S3A2A0A539 114 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 CD8B2A6NJW9 211 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 DEFB108AA8MXU0 73 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 C17orf105B2RV13 164 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 EIF3FO00303 357 aaPredicted RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 ERN1O75460 977 aaKnown RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 ETHE1O95571 254 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 F12P00748 615 aaPredicted RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 SERPINA6P08185 405 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 TMIGD3P0DMS9 266 aaPredicted RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 TNNI3P19429 210 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 FPR1P21462 350 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 HNRNPH1P31943 449 aaKnown RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 SOX18P35713 384 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 SLC1A2P43004 574 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 TIAL1Q01085 375 aaKnown RBP eCLIP13.83□□□□□ -0.2
IFT20-212ENST00000582797 DMTNQ08495 405 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 SP140Q13342 867 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 BBS9Q3SYG4 887 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 PIGGQ5H8A4 983 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 DUPD1Q68J44 220 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 LYPD8Q6UX82 237 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 PALM2Q8IXS6 379 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.83□□□□□ -0.2
IFT20-212ENST00000582797 OR10G3Q8NGC4 313 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 SPACA9Q96E40 222 aaPredicted RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 PIK3IP1Q96FE7 263 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 SECISBP2Q96T21 854 aaKnown RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 NPLQ9BXD5 320 aaPredicted RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 ALOXE3Q9BYJ1 711 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 GSX2Q9BZM3 304 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 ARL15Q9NXU5 204 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 VTI1BQ9UEU0 232 aa13.83□□□□□ -0.2
IFT20-212ENST00000582797 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 MRPS33Q9Y291 106 aaKnown RBP13.83□□□□□ -0.2
IFT20-212ENST00000582797 EFCAB8A8MWE9 144 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 CYR61O00622 381 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 ERI3O43414 337 aaKnown RBP13.82□□□□□ -0.2
IFT20-212ENST00000582797 TRAPPC6AO75865 159 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 CTAGE8P0CG41 777 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 PAMP19021 973 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 SLCO1A2P46721 670 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 NR1H2P55055 460 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 STX4Q12846 297 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 CAPRIN1Q14444 709 aaKnown RBP13.82□□□□□ -0.2
IFT20-212ENST00000582797 MPEG1Q2M385 716 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 VASNQ6EMK4 673 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 UGT3A1Q6NUS8 523 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 CASC4Q6P4E1 433 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 PLXDC2Q6UX71 529 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 ZNF572Q7Z3I7 529 aaPredicted RBP13.82□□□□□ -0.2
IFT20-212ENST00000582797 TMPRSS11BQ86T26 416 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 CTAGE4Q8IX94 777 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 C9orf40Q8IXQ3 194 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 PM20D2Q8IYS1 436 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 ZNF721Q8TF20 911 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 GAL3ST3Q96A11 431 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 ZNF669Q96BR6 464 aaPredicted RBP13.82□□□□□ -0.2
IFT20-212ENST00000582797 QRFPRQ96P65 431 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 NDNQ99608 321 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 UGT2B28Q9BY64 529 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 CNOT11Q9UKZ1 510 aaKnown RBP13.82□□□□□ -0.2
IFT20-212ENST00000582797 WIF1Q9Y5W5 379 aa13.82□□□□□ -0.2
IFT20-212ENST00000582797 CHCHD2Q9Y6H1 151 aaPredicted RBP13.82□□□□□ -0.2
IFT20-212ENST00000582797 AP3B1O00203 1094 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 PHF1O43189 567 aaPredicted RBP13.81□□□□□ -0.2
IFT20-212ENST00000582797 CTIFO43310 598 aaKnown RBP13.81□□□□□ -0.2
IFT20-212ENST00000582797 B3GALT2O43825 422 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 CTNSO60931 367 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 LDB3O75112 727 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 HAUS5O94927 633 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 ACSL3O95573 720 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 IFNA2P01563 188 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 C1QAP02745 245 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 HIST1H2AGP0C0S8 130 aaPredicted RBP13.81□□□□□ -0.2
IFT20-212ENST00000582797 HIST1H2ADP20671 130 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 CERS1P27544 350 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 CPOXP36551 454 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 LIM2P55344 173 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 ID2Q02363 134 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 TNK1Q13470 666 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 THOC5Q13769 683 aaKnown RBP13.81□□□□□ -0.2
IFT20-212ENST00000582797 DHX34Q14147 1143 aaKnown RBP13.81□□□□□ -0.2
IFT20-212ENST00000582797 C10orf62Q5T681 223 aaPredicted RBP13.81□□□□□ -0.2
IFT20-212ENST00000582797 LRRC8EQ6NSJ5 796 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 SYDE1Q6ZW31 735 aaPredicted RBP13.81□□□□□ -0.2
IFT20-212ENST00000582797 MYO1HQ8N1T3 1032 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 SLC22A8Q8TCC7 542 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 SLC44A1Q8WWI5 657 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 MS4A6EQ96DS6 147 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 LINGO1Q96FE5 620 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 WDYHV1Q96HA8 205 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 HIST1H2AHQ96KK5 128 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 ZNF597Q96LX8 424 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 NAP1L3Q99457 506 aaPredicted RBP13.81□□□□□ -0.2
IFT20-212ENST00000582797 HIST1H2AJQ99878 128 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 AIF1LQ9BQI0 150 aa13.81□□□□□ -0.2
IFT20-212ENST00000582797 H2AFJQ9BTM1 129 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms