RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 KHDRBS2Q5VWX1 349 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 ADNP2Q6IQ32 1131 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 AAGABQ6PD74 315 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 FAM198BQ6UWH4 519 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 METTL27Q8N6F8 245 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 UTP15Q8TED0 518 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 MS4A6EQ96DS6 147 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 SPDL1Q96EA4 605 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 MMABQ96EY8 250 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 KCNC2Q96PR1 638 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 MTERF1Q99551 399 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 WDR54Q9H977 334 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 COPS7BQ9H9Q2 264 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 RNPEPL1Q9HAU8 725 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 STOML1Q9UBI4 398 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 AP3M1Q9Y2T2 418 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 MRPS2Q9Y399 296 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 MAP4K5Q9Y4K4 846 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 POLR3HQ9Y535 204 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 PCDHGA6Q9Y5G7 932 aa12.74□□□□□ -0.37
CSNK1D-220ENST00000581737 SCN3AQ9NY46 2000 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 LOC101059948A0A1B0GTJ6 334 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 A0A1B0GTL3 188 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 A0A1W2PP18 115 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 CLEC18AA5D8T8 446 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 MAGEB17A8MXT2 336 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 FOXS1O43638 330 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 PRMT3O60678 531 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 GALR3O60755 368 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 DNAJA2O60884 412 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 MED26O95402 600 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 TGFB1P01137 390 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 DDX5P17844 614 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 ME2P23368 584 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 HNRNPH1P31943 449 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 TSFMP43897 325 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 OR1D4P47884 311 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 HTR6P50406 440 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 POLR2JP52435 117 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 RAB8AP61006 207 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 PSME3P61289 254 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 RPS13P62277 151 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 MC1RQ01726 317 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 OCA2Q04671 838 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 RCAN2Q14206 197 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 DPY19L1Q2PZI1 675 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 DEFB134Q4QY38 66 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 DEPDC1Q5TB30 811 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 IL23RQ5VWK5 629 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 MLIPQ5VWP3 458 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 PAOXQ6QHF9 649 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 BLOC1S3Q6QNY0 202 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 CYP20A1Q6UW02 462 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 CLEC18BQ6UXF7 455 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 OVCH1Q7RTY7 1134 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 ZSCAN1Q8NBB4 408 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 CLEC18CQ8NCF0 446 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 OR9A4Q8NGU2 314 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 RGMAQ96B86 450 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 TBCDQ9BTW9 1192 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 DPY30Q9C005 99 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC26A1Q9H2B4 701 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 DENND2DQ9H6A0 471 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 MKKSQ9NPJ1 570 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 C14orf105Q9NVL8 296 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 AHSPQ9NZD4 102 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 TRPC4Q9UBN4 977 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 ZNF282Q9UDV7 671 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC7A8Q9UHI5 535 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 NAALAD2Q9Y3Q0 740 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 MAU2Q9Y6X3 613 aa12.73□□□□□ -0.37
CSNK1D-220ENST00000581737 B3GALT2O43825 422 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 EEDO75530 441 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SMIM10L1P0DMW3 83 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 LIFP15018 202 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 IL10P22301 178 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SSR2P43308 183 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 NEK2P51955 445 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 PLA2G16P53816 162 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 ACTR3P61158 418 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 NFYCQ13952 458 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC9A5Q14940 896 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 KPNB1Q14974 876 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SGO1Q5FBB7 561 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 HIST2H2BCQ6DN03 193 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 ABHD17CQ6PCB6 329 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 PGM2L1Q6PCE3 622 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 FAM199XQ6PEV8 388 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SCIMPQ6UWF3 145 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 Q6ZSR9 355 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 MSANTD1Q6ZTZ1 278 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 ENDOVQ8N8Q3 282 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 ADAMTS18Q8TE60 1221 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SLC45A3Q96JT2 553 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 ANKRD27Q96NW4 1050 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 F2RL3Q96RI0 385 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 SERINC2Q96SA4 455 aa12.72□□□□□ -0.37
CSNK1D-220ENST00000581737 C1orf50Q9BV19 199 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms