RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 TTC19Q6DKK2 380 aaPredicted RBP11.69□□□□□ -0.54
CBX1-206ENST00000581003 FAM180BQ6P0A1 224 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 METTL2BQ6P1Q9 378 aaKnown RBP11.69□□□□□ -0.54
CBX1-206ENST00000581003 SCIMPQ6UWF3 145 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 NUDT13Q86X67 352 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 LGI4Q8N135 537 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 C4orf33Q8N1A6 199 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 ARMC10Q8N2F6 343 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 SRFBP1Q8NEF9 429 aaKnown RBP11.69□□□□□ -0.54
CBX1-206ENST00000581003 SUN3Q8TAQ9 357 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 ZNF721Q8TF20 911 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 ZBTB9Q96C00 473 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 REPS1Q96D71 796 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 GSTO2Q9H4Y5 243 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 DDX31Q9H8H2 851 aaKnown RBP11.69□□□□□ -0.54
CBX1-206ENST00000581003 TNFRSF12AQ9NP84 129 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 ABI3Q9P2A4 366 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 ADGRE2Q9UHX3 823 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 SH3BGRL2Q9UJC5 107 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 TMCO1Q9UM00 188 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 CLCA3PQ9Y6N3 262 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 CROCCQ5TZA2 2017 aa11.69□□□□□ -0.54
CBX1-206ENST00000581003 PROCP04070 461 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 CLPSP04118 112 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 ATP5F1P24539 256 aaPredicted RBP11.68□□□□□ -0.54
CBX1-206ENST00000581003 TRHRP34981 398 aaPredicted RBP11.68□□□□□ -0.54
CBX1-206ENST00000581003 SOX3P41225 446 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 STT3AP46977 705 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 CYB561P49447 251 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 HLCSP50747 726 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 HK2P52789 917 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 FOXA1P55317 472 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 PHEXP78562 749 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 DUSP2Q05923 314 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 TBL3Q12788 808 aaKnown RBP11.68□□□□□ -0.54
CBX1-206ENST00000581003 INAQ16352 499 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 LGSNQ5TDP6 509 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 SLC25A25Q6KCM7 469 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 CYP20A1Q6UW02 462 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 GFRALQ6UXV0 394 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 NCCRP1Q6ZVX7 275 aaPredicted RBP11.68□□□□□ -0.54
CBX1-206ENST00000581003 COMMD6Q7Z4G1 85 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 C9orf40Q8IXQ3 194 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 TMEM132CQ8N3T6 1108 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 OR14A16Q8NHC5 309 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 C5orf34Q96MH7 638 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 ELOVL6Q9H5J4 265 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 DEPPQ9NTK1 212 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 FETUBQ9UGM5 382 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 PHF11Q9UIL8 331 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 SLC12A4Q9UP95 1085 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 TIMM22Q9Y584 194 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 SPACA6W5XKT8 324 aa11.68□□□□□ -0.54
CBX1-206ENST00000581003 DOPEY2Q9Y3R5 2298 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 ASPDHA6ND91 283 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 NPIPA5E9PKD4 350 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 MANBAO00462 879 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 ZFAND5O76080 213 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 OTCP00480 354 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 IGKV3-11P04433 115 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 CT62P0C5K7 136 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 CD46P15529 392 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 ALOX15P16050 662 aaPredicted RBP11.67□□□□□ -0.54
CBX1-206ENST00000581003 PRKAA2P54646 552 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 ERVK-8P63133 956 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 RNF4P78317 190 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 IFT88Q13099 833 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 RCN2Q14257 317 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 HSDL2Q6YN16 418 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 FGD2Q7Z6J4 655 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 FJX1Q86VR8 437 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 SIAH3Q8IW03 269 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 SULF2Q8IWU5 870 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 CHERPQ8IWX8 916 aaKnown RBP11.67□□□□□ -0.54
CBX1-206ENST00000581003 CYP4Z2PQ8N1L4 340 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 METTL4Q8N3J2 472 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 C1orf52Q8N6N3 182 aaKnown RBP11.67□□□□□ -0.54
CBX1-206ENST00000581003 EIF1ADQ8N9N8 165 aaKnown RBP11.67□□□□□ -0.54
CBX1-206ENST00000581003 MORN4Q8NDC4 146 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 SIMC1Q8NDZ2 872 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 ACMSDQ8TDX5 336 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 SELENOMQ8WWX9 145 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 DGAT2Q96PD7 388 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 RASL10BQ96S79 203 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 SERPINI1Q99574 410 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 CENPKQ9BS16 269 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 CNPPD1Q9BV87 410 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 SHCBP1LQ9BZQ2 653 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 TRIM45Q9H8W5 580 aaPredicted RBP11.67□□□□□ -0.54
CBX1-206ENST00000581003 LYARQ9NX58 379 aaKnown RBP11.67□□□□□ -0.54
CBX1-206ENST00000581003 MYOTQ9UBF9 498 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 SEC14L3Q9UDX4 400 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 PLEKHB1Q9UF11 243 aaPredicted RBP11.67□□□□□ -0.54
CBX1-206ENST00000581003 TRPS1Q9UHF7 1281 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 NPIPA1Q9UND3 350 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 ERVK-19Q9WJR5 959 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 SLC5A6Q9Y289 635 aa11.67□□□□□ -0.54
CBX1-206ENST00000581003 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
CBX1-206ENST00000581003 WIPF3A6NGB9 483 aa11.66□□□□□ -0.54
CBX1-206ENST00000581003 FCHO1O14526 889 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms