RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MORN4Q8NDC4 146 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 MYRIPQ8NFW9 859 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 OR4K14Q8NGD5 310 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 OR5L2Q8NGL0 311 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 PPP1R14CQ8TAE6 165 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 WDR20Q8TBZ3 569 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ELP5Q8TE02 316 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 AENQ8WTP8 325 aaKnown RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 PTPMT1Q8WUK0 201 aaPredicted RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 RIT1Q92963 219 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 CAVIN3Q969G5 261 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 L3HYPDHQ96EM0 354 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 SENP5Q96HI0 755 aaPredicted RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 TMEM237Q96Q45 408 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF382Q96SR6 550 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 HBEGFQ99075 208 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 COL12A1Q99715 3063 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 CNPPD1Q9BV87 410 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 FAIM2Q9BWQ8 316 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 C1QTNF3Q9BXJ4 246 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 SHCBP1LQ9BZQ2 653 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 RNF32Q9H0A6 362 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 DDX31Q9H8H2 851 aaKnown RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 PFDN4Q9NQP4 134 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 OLAHQ9NV23 265 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 TRPS1Q9UHF7 1281 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 PCDHGA10Q9Y5H3 936 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF780BQ9Y6R6 833 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ASH1LQ9NR48 2969 aaKnown RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 MED13Q9UHV7 2174 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 HEATR5BQ9P2D3 2071 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 USP9XQ93008 2570 aaPredicted RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 A0A0A6YYD5 115 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 GOLGA6L10A6NI86 522 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 WASHC1A8K0Z3 465 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 G3V2L1 256 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 WWP2O00308 870 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 PGRMC2O15173 223 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 TMPRSS11DO60235 418 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 FGF17O60258 216 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 PLIN3O60664 434 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SPAG7O75391 227 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ERLIN1O75477 346 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 PRKRAO75569 313 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ITGA10O75578 1167 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ERAL1O75616 437 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SLC25A12O75746 678 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 OR2J2O76002 312 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SEMA3DO95025 777 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SCELO95171 688 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 CHEK2O96017 543 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ENO1P06733 434 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SP1P08047 785 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 NUDT17P0C025 328 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 MYZAPP0CAP1 466 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 HSD3B1P14060 373 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 HSD3B2P26439 372 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 TPP2P29144 1249 aaPredicted RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 STT3AP46977 705 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 HLCSP50747 726 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SSR4P51571 173 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 XKP51811 444 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 HNRNPH2P55795 449 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 MLF1P58340 268 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 TNFRSF17Q02223 184 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ACSM2AQ08AH3 577 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 MRPL49Q13405 166 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 GGTA1PQ4G0N0 100 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 NDUFAF5Q5TEU4 345 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 HLA-DQA1Q5Y7H0 255 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ACSM2BQ68CK6 577 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 OR52E8Q6IFG1 317 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SLC25A25Q6KCM7 469 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 IL20RBQ6UXL0 311 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 COMMD6Q7Z4G1 85 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 C10orf107Q8IVU9 208 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 LGI4Q8N135 537 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 METTL4Q8N3J2 472 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 C1orf52Q8N6N3 182 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 NFAM1Q8NET5 270 aaPredicted RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 DNAJB8Q8NHS0 232 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 CDC26Q8NHZ8 85 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 SLC2A12Q8TD20 617 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 DOK4Q8TEW6 326 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 MZB1Q8WU39 189 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 FAR1Q8WVX9 515 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ASB15Q8WXK1 588 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ANKRD9Q96BM1 317 aaPredicted RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ZBTB9Q96C00 473 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 ART5Q96L15 291 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 PELOQ9BRX2 385 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 C12orf65Q9H3J6 166 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 LIN28AQ9H9Z2 209 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 BRF2Q9HAW0 419 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 EML4Q9HC35 981 aaKnown RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 KCNK9Q9NPC2 374 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 TIMMDC1Q9NPL8 285 aa6.11□□□□□ -1.43
TRAF4-213ENST00000578917 RRAGDQ9NQL2 400 aaPredicted RBP6.11□□□□□ -1.43
TRAF4-213ENST00000578917 OXSMQ9NWU1 459 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms