RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MYCBPQ99417 103 aaPredicted RBP10.54□□□□□ -0.72
SKA2-204ENST00000578519 TPSD1Q9BZJ3 242 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 SEMA6CQ9H3T2 930 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 KLHL31Q9H511 634 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 ZNF556Q9HAH1 456 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 THSD1Q9NS62 852 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 ZCCHC3Q9NUD5 404 aaKnown RBP10.54□□□□□ -0.72
SKA2-204ENST00000578519 LIPT1Q9Y234 373 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 SAMHD1Q9Y3Z3 626 aaKnown RBP10.54□□□□□ -0.72
SKA2-204ENST00000578519 HSPE1-MOB4S4R3N1 261 aa10.54□□□□□ -0.72
SKA2-204ENST00000578519 PRAMEF33A0A0G2JMD5 474 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 A0A0J9YVX5 310 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 EIF4E1BA6NMX2 242 aaKnown RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 A8MVJ9 347 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 AXIN1O15169 862 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 SRPX2O60687 465 aaPredicted RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 SEMG1P04279 462 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 IFNW1P05000 195 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 IFI6P09912 130 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 NR2F1P10589 423 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 NME1P15531 152 aaKnown RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 ALOX12P18054 663 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 MAGP20916 626 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 CDH3P22223 829 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 IGFBP5P24593 272 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 CXCL12P48061 93 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 RGS19P49795 217 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 MVDP53602 400 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 CRISP3P54108 245 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 RAB8AP61006 207 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 PPP2R2BQ00005 443 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 MYBPC1Q00872 1141 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 RPL6Q02878 288 aaKnown RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 HYAL2Q12891 473 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 NKG7Q16617 165 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 COX20Q5RI15 118 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 ZNF793Q6ZN11 406 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 RNF44Q7L0R7 432 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 ZNF551Q7Z340 670 aaPredicted RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 C11orf74Q86VG3 221 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 SLC22A18ASQ8N1D0 253 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 C10orf111Q8N326 155 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 ZNF786Q8N393 782 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 FAM86B1Q8N7N1 296 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 OR5AK3PQ8NH89 298 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 FAM110BQ8TC76 370 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 ADAMTS18Q8TE60 1221 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 UTP15Q8TED0 518 aaKnown RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 JPH3Q8WXH2 748 aaPredicted RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 FKBP10Q96AY3 582 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 SLC6A18Q96N87 628 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 OR2A5Q96R48 311 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 SLC38A3Q99624 504 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 CDX2Q99626 313 aaPredicted RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 GLIPR2Q9H4G4 154 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 CXorf56Q9H5V9 222 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 EXD2Q9NVH0 621 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 DDX18Q9NVP1 670 aaKnown RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 FAM118AQ9NWS6 357 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 TEX10Q9NXF1 929 aaPredicted RBP10.53□□□□□ -0.72
SKA2-204ENST00000578519 TRPC4Q9UBN4 977 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 EPHA6Q9UF33 1036 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 RAB23Q9ULC3 237 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 ERVK-11Q9UQG0 969 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 SLC22A7Q9Y694 548 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 MYO9BQ13459 2157 aa10.53□□□□□ -0.72
SKA2-204ENST00000578519 PCM1Q15154 2024 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 A0A0G2JN53 185 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 A0A0G2JPF8 293 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 A0A1W2PR48 441 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 LILRA5A6NI73 299 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 HNRNPCL2B2RXH8 293 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 HNRNPCL3B7ZW38 293 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 TNFRSF11BO00300 401 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 SLC16A6O15403 523 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 ASNA1O43681 348 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 SLC28A2O43868 658 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 SNAP29O95721 258 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 AIFM1O95831 613 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 NUDT7P0C024 238 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 PABPC4LP0CB38 370 aaKnown RBP10.52□□□□□ -0.73
SKA2-204ENST00000578519 ZNF888P0CJ79 500 aaPredicted RBP10.52□□□□□ -0.73
SKA2-204ENST00000578519 HNRNPCL4P0DMR1 293 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 SMIM10L1P0DMW3 83 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 ITGAMP11215 1152 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 RHCEP18577 417 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 CERS1P27544 350 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 RRM2P31350 389 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 FASLGP48023 281 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 PPM1FP49593 454 aaPredicted RBP10.52□□□□□ -0.73
SKA2-204ENST00000578519 PCBP3P57721 371 aaKnown RBP10.52□□□□□ -0.73
SKA2-204ENST00000578519 CSNK2BP67870 215 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 KCNJ10P78508 379 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 TNFRSF17Q02223 184 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 EEF1A2Q05639 463 aaKnown RBP10.52□□□□□ -0.73
SKA2-204ENST00000578519 CEBPEQ15744 281 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 FCRL6Q6DN72 434 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 USP51Q70EK9 711 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 SZRD1Q7Z422 152 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms