RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	TEX10	Q9NXF1	929 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GPRC5B	Q9NZH0	403 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CTNNAL1	Q9UBT7	734 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TEKT2	Q9UIF3	430 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FBXW2	Q9UKT8	454 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CES1P1	Q9UKY3	287 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PPT2	Q9UMR5	302 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	YARS2	Q9Y2Z4	477 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	L3MBTL1	Q9Y468	752 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DOCK7	Q96N67	2140 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TLN2	Q9Y4G6	2542 aa		4.1	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MED12L	Q86YW9	2145 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ESYT3	A0FGR9	886 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GLOD5	A6NK44	160 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM90A27P	A6NNH2	459 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EFCAB8	A8MWE9	144 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C17orf105	B2RV13	164 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NPIPA2	E9PIF3	369 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NPIPA3	F8WFD2	350 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CDK2AP1	O14519	115 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SIAH2	O43255	324 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PROM1	O43490	865 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	B3GALT2	O43825	422 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CTAG2	O75638	210 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZFAND5	O76080	213 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AIFM1	O95831	613 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GBA	P04062	536 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C2	P06681	752 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HOXD4	P09016	255 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FBXO45	P0C2W1	286 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CHN1	P15882	459 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ABO	P16442	354 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CNR1	P21554	472 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SSTR4	P31391	388 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DNAJA1	P31689	397 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GRK3	P35626	688 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GP5	P40197	560 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MSH2	P43246	934 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	STT3A	P46977	705 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SSR4	P51571	173 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MTTP	P55157	894 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ARL4C	P56559	192 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CLDN15	P56746	228 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RAB10	P61026	200 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GNG11	P61952	73 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RPS13	P62277	151 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PPIA	P62937	165 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AP2B1	P63010	937 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FOLH1	Q04609	750 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CRYZ	Q08257	329 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TRAF3	Q13114	568 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC13A2	Q13183	592 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SETDB1	Q15047	1291 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EBP	Q15125	230 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PDK4	Q16654	411 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MPEG1	Q2M385	716 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PRAMEF20	Q5VT98	475 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SULT1C3	Q6IMI6	304 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GRHL2	Q6ISB3	625 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C22orf34	Q6ZV56	151 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CDH24	Q86UP0	819 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRRC25	Q8N386	305 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	L3MBTL4	Q8NA19	623 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	POGLUT1	Q8NBL1	392 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MORN4	Q8NDC4	146 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TNIP2	Q8NFZ5	429 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR52B6	Q8NGF0	335 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR8K3	Q8NH51	312 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SUN3	Q8TAQ9	357 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RNF138	Q8WVD3	245 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ISL2	Q96A47	359 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PTCD3	Q96EY7	689 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C11orf24	Q96F05	449 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF681	Q96N22	645 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CDK15	Q96Q40	435 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NAP1L3	Q99457	506 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MTERF1	Q99551	399 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EGFL8	Q99944	293 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KLHDC3	Q9BQ90	382 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TMUB1	Q9BVT8	246 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FUT8	Q9BYC5	575 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RTN4R	Q9BZR6	473 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR8D2	Q9GZM6	311 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EPB41L4B	Q9H329	900 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DDX31	Q9H8H2	851 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SAYSD1	Q9NPB0	183 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FARSB	Q9NSD9	589 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	WHRN	Q9P202	907 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SUCO	Q9UBS9	1254 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF639	Q9UID6	485 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RNF11	Q9Y3C5	154 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TSC22D4	Q9Y3Q8	395 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DYRK1B	Q9Y463	629 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SAR1B	Q9Y6B6	198 aa		4.09	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ROS1	P08922	2347 aa		4.09	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms