RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TGFBR3LH3BV60 316 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 MANBAO00462 879 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 CLDN4O14493 209 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 TMPRSS11DO60235 418 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 PRAMEF2O60811 474 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 TRIM13O60858 407 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 WDPCPO95876 746 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 F10P00742 488 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 STSP08842 583 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 HMOX2P30519 316 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 HTR6P50406 440 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 CASP6P55212 293 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 HNRNPH2P55795 449 aaKnown RBP11.94□□□□□ -0.5
CCDC57-211ENST00000578187 OR4D2P58180 307 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 TAS2R50P59544 299 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 TNFRSF17Q02223 184 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 ACTN3Q08043 901 aaPredicted RBP11.94□□□□□ -0.5
CCDC57-211ENST00000578187 CSTF3Q12996 717 aaKnown RBP11.94□□□□□ -0.5
CCDC57-211ENST00000578187 SLAMF1Q13291 335 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.94□□□□□ -0.5
CCDC57-211ENST00000578187 CFAP157Q5JU67 520 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 MTFR2Q6P444 385 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 GFRALQ6UXV0 394 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 FJX1Q86VR8 437 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 METTL4Q8N3J2 472 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 HORMAD2Q8N7B1 307 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 PGM2Q96G03 612 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 RUBCNLQ9H714 662 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 KCNK13Q9HB14 408 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 RRAGDQ9NQL2 400 aaPredicted RBP11.94□□□□□ -0.5
CCDC57-211ENST00000578187 LYARQ9NX58 379 aaKnown RBP11.94□□□□□ -0.5
CCDC57-211ENST00000578187 MS4A12Q9NXJ0 267 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 ADAM29Q9UKF5 820 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 SPACA6W5XKT8 324 aa11.94□□□□□ -0.5
CCDC57-211ENST00000578187 SAGE2PA6NJ88 616 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 CTNSO60931 367 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 CPN2P22792 545 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 COL8A1P27658 744 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 ALDH3A1P30838 453 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 ETV4P43268 484 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 FOXA1P55317 472 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 SLC26A5P58743 744 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 IGLV3-21P80748 117 aaPredicted RBP11.93□□□□□ -0.5
CCDC57-211ENST00000578187 GALNT1Q10472 559 aaPredicted RBP11.93□□□□□ -0.5
CCDC57-211ENST00000578187 TBL3Q12788 808 aaKnown RBP11.93□□□□□ -0.5
CCDC57-211ENST00000578187 ASPHQ12797 758 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 SLC13A2Q13183 592 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 TERF2Q15554 542 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 MEP1AQ16819 746 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 SGO1Q5FBB7 561 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 CYP20A1Q6UW02 462 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 GPR180Q86V85 440 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 EXOC3L1Q86VI1 746 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 SLC5A8Q8N695 610 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 AMER2Q8N7J2 671 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 M1APQ8TC57 530 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 METTL6Q8TCB7 284 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 KCNA7Q96RP8 456 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 HBEGFQ99075 208 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 TRMOQ9BU70 441 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 GATA5Q9BWX5 397 aaPredicted RBP11.93□□□□□ -0.5
CCDC57-211ENST00000578187 MRPL1Q9BYD6 325 aaKnown RBP11.93□□□□□ -0.5
CCDC57-211ENST00000578187 MMP25Q9NPA2 562 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 SEC14L3Q9UDX4 400 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 FBXW2Q9UKT8 454 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 SLC12A4Q9UP95 1085 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 ATG4BQ9Y4P1 393 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 ASB4Q9Y574 426 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 ACTL7BQ9Y614 415 aa11.93□□□□□ -0.5
CCDC57-211ENST00000578187 SERTM1A2A2V5 107 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 ENO4A6NNW6 628 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 CTIFO43310 598 aaKnown RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 PROM1O43490 865 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 ULK1O75385 1050 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 UNC5CO95185 931 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 NUDT7P0C024 238 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 FAM58BPP0C7Q3 252 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 TPP2P29144 1249 aaPredicted RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 BUD31P41223 144 aaPredicted RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 ZNF766Q5HY98 468 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 ACER2Q5QJU3 275 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 C1QL3Q5VWW1 255 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 C18orf63Q68DL7 685 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 ZNF324BQ6AW86 544 aaPredicted RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 H3F3CQ6NXT2 135 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 COMMD6Q7Z4G1 85 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 CLNKQ7Z7G1 428 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 GBP7Q8N8V2 638 aaPredicted RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 FAM98AQ8NCA5 519 aaKnown RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 NFAM1Q8NET5 270 aaPredicted RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 TAAR6Q96RI8 345 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 UTP23Q9BRU9 249 aaKnown RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 MECRQ9BV79 373 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 ACPTQ9BZG2 426 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 TNFRSF12AQ9NP84 129 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms