RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 PSMA8Q8TAA3 256 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 CIDECQ96AQ7 238 aaPredicted RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 SH3YL1Q96HL8 342 aaPredicted RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 CNDP2Q96KP4 475 aaKnown RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZFYVE21Q9BQ24 234 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SLC35A5Q9BS91 424 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 CCM2Q9BSQ5 444 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZSCAN5AQ9BUG6 496 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 DUSP23Q9BVJ7 150 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZDHHC4Q9NPG8 344 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SPHK2Q9NRA0 654 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 RHCGQ9UBD6 479 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 PLAGL1Q9UM63 463 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 CASP8AP2Q9UKL3 1982 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 FUOMA2VDF0 154 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 C5orf58C9J3I9 102 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 AGRPO00253 132 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 KLK1P06870 262 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 HOXB6P17509 224 aaKnown RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 C21orf33P30042 268 aaPredicted RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 TIA1P31483 386 aaKnown RBP eCLIP5.11□□□□□ -1.59
VAPA-203ENST00000577539 TAS2R50P59544 299 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SLC35A2P78381 396 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 MTAPQ13126 283 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 DNASE1L3Q13609 305 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SCARB2Q14108 478 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SCN5AQ14524 2016 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SPDYE7PQ495Y7 208 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 GCNT6Q5T4J0 391 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 KDM4DQ6B0I6 523 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 LAIR1Q6GTX8 287 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 GRHL2Q6ISB3 625 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ADCK2Q7Z695 626 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZNF605Q86T29 641 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 RNF130Q86XS8 419 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ANKRD13BQ86YJ7 626 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 TMC8Q8IU68 726 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 FAM217AQ8IXS0 508 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 LGI4Q8N135 537 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 TRAM1L1Q8N609 369 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SLC5A8Q8N695 610 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 OR52E4Q8NGH9 312 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 MCFD2Q8NI22 146 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 WDR48Q8TAF3 677 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 POP5Q969H6 163 aaKnown RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 FKBP10Q96AY3 582 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 TAMM41Q96BW9 452 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 MAGEB10Q96LZ2 347 aaPredicted RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 SAMD11Q96NU1 681 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZNF347Q96SE7 839 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SORBS1Q9BX66 1292 aaKnown RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 CCNB1IP1Q9NPC3 277 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 POLE4Q9NR33 117 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ABCB10Q9NRK6 738 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 IL36AQ9UHA7 158 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ASF1AQ9Y294 204 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 NINQ8N4C6 2090 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 EFCAB9A8MZ26 197 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 QSOX1O00391 747 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SLC22A1O15245 554 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SCN2BO60939 215 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 SLCO2B1O94956 709 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 AP2A2O94973 939 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 CELA2BP08218 269 aaPredicted RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 CTSAP10619 480 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 CCL5P13501 91 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 IDSP22304 550 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 PPIBP23284 216 aaKnown RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 BCAP31P51572 246 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 HBA1P69905 142 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 CARTPTQ16568 116 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 IFI44LQ53G44 452 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZNF385BQ569K4 471 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 TNFAIP8L2Q6P589 184 aaPredicted RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 USP53Q70EK8 1073 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 COMMD6Q7Z4G1 85 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 TSPYL5Q86VY4 417 aaPredicted RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZNF740Q8NDX6 193 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 OR8J2Q8NGG1 315 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 WDR20Q8TBZ3 569 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZNF480Q8WV37 535 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 DNASE1L2Q92874 299 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 LGALS12Q96DT0 336 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 DOHHQ9BU89 302 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 EXOSC4Q9NPD3 245 aaKnown RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 ATAD3AQ9NVI7 634 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 TBCCD1Q9NVR7 557 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ZNF282Q9UDV7 671 aaPredicted RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 OGDHLQ9ULD0 1010 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 ERGIC3Q9Y282 383 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 HCFC2Q9Y5Z7 792 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 CFAP20Q9Y6A4 193 aaKnown RBP5.11□□□□□ -1.59
VAPA-203ENST00000577539 THSD7BQ9C0I4 1608 aa5.11□□□□□ -1.59
VAPA-203ENST00000577539 KNL1Q8NG31 2342 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 A0A0G2JN53 185 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ANKDD1BA6NHY2 528 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 HIDE1A8MVS5 230 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 RTCAO00442 366 aaKnown RBP5.1□□□□□ -1.59
VAPA-203ENST00000577539 AIREO43918 545 aa5.1□□□□□ -1.59
VAPA-203ENST00000577539 ATP6V1G1O75348 118 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms