RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 SIRT5Q9NXA8 310 aa11.9□□□□□ -0.5
CDK5RAP3-203ENST00000577442 RALYQ9UKM9 306 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-203ENST00000577442 CLDN16Q9Y5I7 305 aa11.9□□□□□ -0.5
CDK5RAP3-203ENST00000577442 CLCA3PQ9Y6N3 262 aa11.9□□□□□ -0.5
CDK5RAP3-203ENST00000577442 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
CDK5RAP3-203ENST00000577442 C1orf226A1L170 272 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 A8MUA0 341 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 HMGB1P1B2RPK0 211 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 TGFBR3LH3BV60 316 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 FGF17O60258 216 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 GPR75O95800 540 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ITGAMP11215 1152 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 BGNP21810 368 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PRPH2P23942 346 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 SOX11P35716 441 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 STT3AP46977 705 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ABCE1P61221 599 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 FOLH1Q04609 750 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 BTKQ06187 659 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 KLRB1Q12918 225 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 NFATC3Q12968 1075 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 MFAP5Q13361 173 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 NR6A1Q15406 480 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 NDUFAF5Q5TEU4 345 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 FAM219BQ5XKK7 198 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ATG16L1Q676U5 607 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ISLR2Q6UXK2 745 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 DDIASQ8IXT1 998 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 SLC5A8Q8N695 610 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 TEX19Q8NA77 164 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 B3GNT7Q8NFL0 401 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 RAB3IL1Q8TBN0 382 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 MGARPQ8TDB4 240 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ARL8AQ96BM9 186 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 VMP1Q96GC9 406 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 APIPQ96GX9 242 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ART5Q96L15 291 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 DGAT2Q96PD7 388 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 LMF1Q96S06 567 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 SH3GL2Q99962 352 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 KCNK13Q9HB14 408 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 C1orf109Q9NX04 203 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 TEX10Q9NXF1 929 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ABI3Q9P2A4 366 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 VTI1BQ9UEU0 232 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PSME2Q9UL46 239 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 WBP11Q9Y2W2 641 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PCDHA9Q9Y5H5 950 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 HEMK1Q9Y5R4 338 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 CPAMD8Q8IZJ3 1885 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 BSNQ9UPA5 3926 aa11.89□□□□□ -0.51
CDK5RAP3-203ENST00000577442 UQCRHLA0A096LP55 91 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 C17orf105B2RV13 164 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 TMEM233B4DJY2 109 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 OR10H2O60403 315 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 CELA2AP08217 269 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ANXA4P09525 319 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 DRD2P14416 443 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ALOX15P16050 662 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 TNNI3P19429 210 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PIK3R1P27986 724 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 SLC1A6P48664 564 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 CLCN2P51788 898 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 WDR4P57081 412 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ID2Q02363 134 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ZNF763Q0D2J5 394 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 STX3Q13277 289 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 HEPACAMQ14CZ8 416 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 C6orf163Q5TEZ5 329 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ABHD17BQ5VST6 288 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 IGFL3Q6UXB1 125 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 SAMD14Q8IZD0 417 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ST13P4Q8IZP2 240 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 LGI4Q8N135 537 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ZADH2Q8N4Q0 377 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 SIRT6Q8N6T7 355 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 MORN4Q8NDC4 146 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 AGR3Q8TD06 166 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ANKRD9Q96BM1 317 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 TM4SF18Q96CE8 201 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 RBM18Q96H35 190 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PPP3R2Q96LZ3 170 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ILKAPQ9H0C8 392 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 LRTM1Q9HBL6 345 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PTGFRNQ9P2B2 879 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 COPS7AQ9UBW8 275 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 ANAPC2Q9UJX6 822 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PPIEQ9UNP9 301 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 TMED5Q9Y3A6 229 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 RAP2CQ9Y3L5 183 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 DNAJC15Q9Y5T4 150 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 SVILO95425 2214 aa11.88□□□□□ -0.51
CDK5RAP3-203ENST00000577442 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-203ENST00000577442 DYTNA2CJ06 578 aa11.87□□□□□ -0.51
CDK5RAP3-203ENST00000577442 GLOD5A6NK44 160 aa11.87□□□□□ -0.51
CDK5RAP3-203ENST00000577442 CDK2AP1O14519 115 aa11.87□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PIP5K1BO14986 540 aa11.87□□□□□ -0.51
CDK5RAP3-203ENST00000577442 SEC22BO75396 215 aa11.87□□□□□ -0.51
CDK5RAP3-203ENST00000577442 PRKRAO75569 313 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms