RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CRYZQ08257 329 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 FOXF2Q12947 444 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 PDAP1Q13442 181 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 SLBPQ14493 270 aaKnown RBP eCLIP9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 ABHD17CQ6PCB6 329 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 SBSNQ6UWP8 590 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 TMIGD1Q6UXZ0 262 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 DGAT2L6Q6ZPD8 337 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 VN1R5Q7Z5H4 357 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 LACC1Q8IV20 430 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 C9orf40Q8IXQ3 194 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 RASGEF1CQ8N431 466 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 MCUQ8NE86 351 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 OR10G3Q8NGC4 313 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 ZNF592Q92610 1267 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 SENP5Q96HI0 755 aaPredicted RBP9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 F2RL3Q96RI0 385 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 TRIB1Q96RU8 372 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 SERINC2Q96SA4 455 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 MAPKAP1Q9BPZ7 522 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 FAM167BQ9BTA0 163 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 REXO4Q9GZR2 422 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 JKAMPQ9P055 326 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 SLC17A6Q9P2U8 582 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 CAMK2AQ9UQM7 478 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 SLC6A5Q9Y345 797 aa9.28□□□□□ -0.92
NPLOC4-220ENST00000576940 HIVEP2P31629 2446 aa9.27□□□□□ -0.92
NPLOC4-220ENST00000576940 ZANQ9Y493 2812 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 CDC7O00311 574 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 SMPD2O60906 423 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 ENO2P09104 434 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 GDF1P27539 372 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 CDC25BP30305 580 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 ZNF75DP51815 510 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 PPP2R2BQ00005 443 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 SORDQ00796 357 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 EFTUD2Q15029 972 aaKnown RBP eCLIP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 PPP1R3AQ16821 1122 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 NSUN5P2Q63ZY6 315 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 TRIM40Q6P9F5 258 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 SLCO4C1Q6ZQN7 724 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 YTHDF3Q7Z739 585 aaKnown RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 LUZP2Q86TE4 346 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 GPATCH11Q8N954 259 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 C9orf106Q8NAJ2 232 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 FAM13CQ8NE31 585 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 OR2L5Q8NG80 312 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 NUBPLQ8TB37 319 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 ANKRD9Q96BM1 317 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 SPACA9Q96E40 222 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 DACH2Q96NX9 599 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 BDH2Q9BUT1 245 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 RBM24Q9BX46 236 aaKnown RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 PRDM14Q9GZV8 571 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 XAB2Q9HCS7 855 aaKnown RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 QPCTLQ9NXS2 382 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 COPS7AQ9UBW8 275 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 CNOT11Q9UKZ1 510 aaKnown RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 ZNF490Q9ULM2 529 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 ZKSCAN5Q9Y2L8 839 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 VWA7Q9Y334 891 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 CHCHD2Q9Y6H1 151 aaPredicted RBP9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 ATRQ13535 2644 aa9.27□□□□□ -0.93
NPLOC4-220ENST00000576940 A0A088AWK7 358 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 SH3D21A4FU49 640 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 ANKDD1BA6NHY2 528 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 RTCAO00442 366 aaKnown RBP9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 CASKO14936 926 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 PRAMEF4O60810 478 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 SH3BGRLO75368 114 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 TRIM3O75382 744 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 CLEC3AO75596 197 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 WDR47O94967 919 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 IGKV3-11P04433 115 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 CCDC175P0C221 793 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 BMP7P18075 431 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 GNAZP19086 355 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 ZNF10P21506 573 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 CXCR5P32302 372 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 OPRM1P35372 400 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 MAGEA3P43357 314 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 SLCO1A2P46721 670 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 SERTAD2Q14140 314 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 ADPRMQ3LIE5 342 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 EIPR1Q53HC9 387 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 DCST1Q5T197 706 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 PRAMEF9Q5VWM5 478 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 BICRALQ6AI39 1079 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 VASNQ6EMK4 673 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 TTC27Q6P3X3 843 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 PLXDC2Q6UX71 529 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 TMEM64Q6YI46 380 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 ZNF793Q6ZN11 406 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 CAPN12Q6ZSI9 719 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 SYDE1Q6ZW31 735 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 UBE3DQ7Z6J8 389 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 LRRC75A-AS1Q8N1F1 130 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 TXLNBQ8N3L3 684 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 SIMC1Q8NDZ2 872 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 TTLQ8NG68 377 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 394.9 ms