RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 C4orf51C9J302 202 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 H7C1Q1 480 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 ERN1O75460 977 aaKnown RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 TTC4O95801 387 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 C1QAP02745 245 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 F7P08709 466 aaPredicted RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 CCDC175P0C221 793 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 RFPL3SP0C7P2 107 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 PGAM1P18669 254 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 FPR1P21462 350 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 GDF1P27539 372 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 HNRNPH1P31943 449 aaKnown RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 GCKP35557 465 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 MSH2P43246 934 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 KCNC1P48547 511 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 ZNF136P52737 540 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 TERF1P54274 439 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 CDKL1Q00532 357 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 DUSP8Q13202 625 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 TRIP13Q15645 432 aaPredicted RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 ADPRMQ3LIE5 342 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 ANKRD22Q5VYY1 191 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 ABHD17CQ6PCB6 329 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 POMZP3Q6PJE2 187 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 SYDE1Q6ZW31 735 aaPredicted RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 GALNT7Q86SF2 657 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 CTAGE6Q86UF2 777 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 SPNS2Q8IVW8 549 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMG6-218ENST00000575454 TMEM52Q8NDY8 209 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 ZNF592Q92610 1267 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 RBM18Q96H35 190 aaKnown RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 SENP5Q96HI0 755 aaPredicted RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 JSRP1Q96MG2 331 aaPredicted RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 ZFP3Q96NJ6 502 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 QRFPRQ96P65 431 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 KCNC2Q96PR1 638 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 DOHHQ9BU89 302 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 AICDAQ9GZX7 198 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 SLC6A15Q9H2J7 730 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 EPB41L4BQ9H329 900 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 GPRC5BQ9NZH0 403 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 JKAMPQ9P055 326 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 VWA7Q9Y334 891 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 RTTNQ86VV8 2226 aa8.27□□□□□ -1.09
SMG6-218ENST00000575454 SNRNP200O75643 2136 aaKnown RBP8.27□□□□□ -1.09
SMG6-218ENST00000575454 A0A0G2JN53 185 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 IQANK1A0A1B0GTG1 560 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 MBD3L4A6NDZ8 208 aaPredicted RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 MBD3L3A6NE82 208 aaPredicted RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 MBD3L5A6NJ08 208 aaPredicted RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 GOLGA8MH3BSY2 632 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 TP53I11O14683 189 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 ZNF354AO60765 605 aaPredicted RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 TRAPPC6AO75865 159 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 SNX4O95219 450 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 AHSGP02765 367 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 HPNP05981 417 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 FBXO45P0C2W1 286 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 MAGEA3P43357 314 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 STT3AP46977 705 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 CPA2P48052 419 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 TRPC1P48995 793 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 VPS41P49754 854 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 RPP38P78345 283 aaKnown RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 CRYZQ08257 329 aaKnown RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 RCAN2Q14206 197 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 SLBPQ14493 270 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMG6-218ENST00000575454 NHSL2Q5HYW2 709 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 RBM20Q5T481 1227 aaKnown RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 PRAMEF20Q5VT98 475 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 VASNQ6EMK4 673 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 ADGRD1Q6QNK2 874 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 SCIMPQ6UWF3 145 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 SLCO4C1Q6ZQN7 724 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 SLC29A4Q7RTT9 530 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 CNTN4Q8IWV2 1026 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 TAGAPQ8N103 731 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 NKAPQ8N5F7 415 aaKnown RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 ZNF321PQ8N8H1 164 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 FAM13CQ8NE31 585 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 MBD3L2Q8NHZ7 208 aaPredicted RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 ZNF721Q8TF20 911 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 SREK1Q8WXA9 508 aaKnown RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 SIGLEC10Q96LC7 697 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 ZNF597Q96LX8 424 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 Q96MF0 132 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 DGAT2Q96PD7 388 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 TRIB1Q96RU8 372 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 CSF3RQ99062 836 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 EGFL8Q99944 293 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 DESI2Q9BSY9 194 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 NAT9Q9BTE0 207 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 TBCDQ9BTW9 1192 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 SFXN3Q9BWM7 321 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
SMG6-218ENST00000575454 ACBD3Q9H3P7 528 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 EHD1Q9H4M9 534 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 CAMK2AQ9UQM7 478 aa8.26□□□□□ -1.09
SMG6-218ENST00000575454 CHCHD2Q9Y6H1 151 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms