RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SCRN2Q96FV2 425 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 ZFP3Q96NJ6 502 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 OPALINQ96PE5 141 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 DOHHQ9BU89 302 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SORBS1Q9BX66 1292 aaKnown RBP9.15□□□□□ -0.94
CCDC40-212ENST00000574799 TSSK6Q9BXA6 273 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 ELAC1Q9H777 363 aaKnown RBP9.15□□□□□ -0.94
CCDC40-212ENST00000574799 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 ZNF226Q9NYT6 803 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 PTGFRNQ9P2B2 879 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SLC35F4A4IF30 521 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SLC43A1O75387 559 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 IFNA14P01570 189 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 CXCL10P02778 98 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SCG5P05408 212 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 BLVRAP53004 296 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SLC14A1Q13336 389 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 P2RY14Q15391 338 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SF3A2Q15428 464 aaKnown RBP9.15□□□□□ -0.94
CCDC40-212ENST00000574799 COL28A1Q2UY09 1125 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 TMEM81Q6P7N7 255 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.15□□□□□ -0.94
CCDC40-212ENST00000574799 CBLL1Q75N03 491 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 TMCO2Q7Z6W1 182 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-212ENST00000574799 TMEM150AQ86TG1 271 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 GPR156Q8NFN8 814 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 OR52P1PQ8NH57 321 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 UPRTQ96BW1 309 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SCLYQ96I15 445 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 FUBP3Q96I24 572 aaKnown RBP eCLIP9.15□□□□□ -0.94
CCDC40-212ENST00000574799 ART5Q96L15 291 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SMIM14Q96QK8 99 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 EPYCQ99645 322 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 MAPKAP1Q9BPZ7 522 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 SLC6A15Q9H2J7 730 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 TXNL4BQ9NX01 149 aaKnown RBP9.15□□□□□ -0.94
CCDC40-212ENST00000574799 CRLS1Q9UJA2 301 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 PCDHGC4Q9Y5F7 938 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 RAI2Q9Y5P3 530 aa9.15□□□□□ -0.94
CCDC40-212ENST00000574799 MROH6A6NGR9 719 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 DRGXA6NNA5 263 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 OR7A17O14581 309 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 GPR39O43194 453 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 GALTP07902 379 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 ANXA5P08758 320 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF7P17097 686 aaPredicted RBP9.15□□□□□ -0.95
CCDC40-212ENST00000574799 HTR7P34969 479 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 RECQLP46063 649 aaPredicted RBP9.15□□□□□ -0.95
CCDC40-212ENST00000574799 ALDH9A1P49189 494 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 VEGFBP49765 207 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 CLCN4P51793 760 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 EPHA5P54756 1037 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 CTBP2P56545 445 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 CLDN8P56748 225 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 NTRK2Q16620 822 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 PAQR6Q6TCH4 344 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 PRSS55Q6UWB4 352 aaPredicted RBP9.15□□□□□ -0.95
CCDC40-212ENST00000574799 RTL4Q6ZR62 310 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 UMODL1-AS1Q8N2C9 162 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 C9orf62Q8N4C0 152 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF655Q8N720 491 aaPredicted RBP9.15□□□□□ -0.95
CCDC40-212ENST00000574799 LILRB1Q8NHL6 650 aaPredicted RBP9.15□□□□□ -0.95
CCDC40-212ENST00000574799 ARRDC2Q8TBH0 407 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 CREB3L4Q8TEY5 395 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 UFD1Q92890 307 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 ZBED6CLQ96FA7 236 aaPredicted RBP9.15□□□□□ -0.95
CCDC40-212ENST00000574799 C12orf66Q96MD2 445 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 SERPINB11Q96P15 392 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF416Q9BWM5 594 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 SCPEP1Q9HB40 452 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 HHATLQ9HCP6 504 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 FANCFQ9NPI8 374 aa9.15□□□□□ -0.95
CCDC40-212ENST00000574799 YARS2Q9Y2Z4 477 aaKnown RBP9.15□□□□□ -0.95
CCDC40-212ENST00000574799 OR5K3A6NET4 321 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CBX4O00257 560 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 EEF1E1O43324 174 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 GREM1O60565 184 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SLC25A14O95258 325 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SELPP16109 830 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 DGKAP23743 735 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 LCN1P31025 176 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 MAGEA2P43356 314 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CRISP1P54107 249 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 PUDPQ08623 228 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 TOR1AIP1Q5JTV8 583 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 NDUFAF5Q5TEU4 345 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CXorf57Q6NSI4 855 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 FBXL22Q6P050 247 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 LIPIQ6XZB0 460 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 DEF8Q6ZN54 512 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 MBOAT1Q6ZNC8 495 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 BCDIN3DQ7Z5W3 292 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 PIANPQ8IYJ0 282 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CLDN19Q8N6F1 224 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SLAIN1Q8ND83 568 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SLC9A6Q92581 669 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 NXPE2Q96DL1 559 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 GSX2Q9BZM3 304 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 DPAGT1Q9H3H5 408 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 WASH6PQ9NQA3 447 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms