RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 PHF7Q9BWX1 381 aaPredicted RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 GPR174Q9BXC1 333 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 CPEB1Q9BZB8 566 aaKnown RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 SPRTNQ9H040 489 aaPredicted RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 RPF2Q9H7B2 306 aaKnown RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 GPRC5BQ9NZH0 403 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 DNAJC27Q9NZQ0 273 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 THAP10Q9P2Z0 257 aaPredicted RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 MBD1Q9UIS9 605 aaPredicted RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 RUVBL1Q9Y265 456 aaKnown RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 SLC27A6Q9Y2P4 619 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 EFCAB9A8MZ26 197 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 CHURC1-FNTBB4DL54 471 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 FAM47E-STBD1D6RA91 191 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 E7EQ34 232 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 UBFD1O14562 309 aaKnown RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 KLF4O43474 513 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 PDE9AO76083 593 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 GADD45GO95257 159 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 SMIM18P0DKX4 95 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 LAMP1P11279 417 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 CXCR2P25025 360 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 PRDX6P30041 224 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 STX4Q12846 297 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 ZNF267Q14586 743 aaPredicted RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 COL19A1Q14993 1142 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 UGT8Q16880 541 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 ODF4Q2M2E3 257 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 TNFAIP8L3Q5GJ75 292 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 PRAMEF13Q5VWM6 474 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 KIAA1161Q6NSJ0 714 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 CYS1Q717R9 158 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 ASCC1Q8N9N2 400 aaKnown RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 GALNT6Q8NCL4 622 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 GLYATL1Q969I3 302 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 HSH2DQ96JZ2 352 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 NUDT16L1Q9BRJ7 211 aaKnown RBP7.22□□□□□ -1.25
RPA1-207ENST00000574049 INIPQ9NRY2 104 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 CLN6Q9NWW5 311 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 OBP2AQ9NY56 170 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 ACTR3BQ9P1U1 418 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 ASB1Q9Y576 335 aa7.22□□□□□ -1.25
RPA1-207ENST00000574049 TMEM221A6NGB7 291 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 OR6C70A6NIJ9 312 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 B4DGG1 531 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 HCN1O60741 890 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 UGT2B17O75795 530 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 ETFAP13804 333 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 BMP7P18075 431 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 POU3F3P20264 500 aaPredicted RBP7.21□□□□□ -1.25
RPA1-207ENST00000574049 FDXRP22570 491 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 ACSL1P33121 698 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 ANXA11P50995 505 aaKnown RBP7.21□□□□□ -1.25
RPA1-207ENST00000574049 ILF2Q12905 390 aaKnown RBP7.21□□□□□ -1.25
RPA1-207ENST00000574049 HERC3Q15034 1050 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 ZMYND11Q15326 602 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 CTSL3PQ5NE16 218 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 HLA-DQA1Q5Y7H0 255 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 FAM180AQ6UWF9 173 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 RNF111Q6ZNA4 994 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 OLIG3Q7RTU3 272 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 FGD2Q7Z6J4 655 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 LNX2Q8N448 690 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 SVOPQ8N4V2 548 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 IL17RCQ8NAC3 791 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 ABHD11Q8NFV4 315 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 UBE2E3Q969T4 207 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 TBC1D20Q96BZ9 403 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 DIRAS2Q96HU8 199 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 BIRC8Q96P09 236 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 RBM4BQ9BQ04 359 aaKnown RBP7.21□□□□□ -1.25
RPA1-207ENST00000574049 ZSCAN5AQ9BUG6 496 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 RBM4Q9BWF3 364 aaKnown RBP7.21□□□□□ -1.25
RPA1-207ENST00000574049 BTBD1Q9H0C5 482 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 SRMSQ9H3Y6 488 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 ERVK13-1Q9NX77 482 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 PCTPQ9UKL6 214 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 UTS2RQ9UKP6 389 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 YARS2Q9Y2Z4 477 aaKnown RBP7.21□□□□□ -1.25
RPA1-207ENST00000574049 PCDHGB6Q9Y5F9 930 aa7.21□□□□□ -1.25
RPA1-207ENST00000574049 SPTBN1Q01082 2364 aaKnown RBP7.21□□□□□ -1.25
RPA1-207ENST00000574049 CUL9Q8IWT3 2517 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 UNC13CQ8NB66 2214 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 H0Y8X5 98 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 GFRA2O00451 464 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 B4GALT2O60909 372 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 C8GP07360 202 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 DCNP07585 359 aaKnown RBP7.21□□□□□ -1.26
RPA1-207ENST00000574049 POLR2CP19387 275 aaPredicted RBP7.21□□□□□ -1.26
RPA1-207ENST00000574049 SSTR4P31391 388 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 TGFBR1P36897 503 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 UGT2B15P54855 530 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 BTN3A2P78410 334 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 BIKQ13323 160 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 TDGQ13569 410 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 LGI4Q8N135 537 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 ZNF433Q8N7K0 673 aaPredicted RBP7.21□□□□□ -1.26
RPA1-207ENST00000574049 FAM86B1Q8N7N1 296 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 ZNF740Q8NDX6 193 aa7.21□□□□□ -1.26
RPA1-207ENST00000574049 OR5M3Q8NGP4 307 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms