RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SORBS2O94875 1100 aaKnown RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 FABP3P05413 133 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 GABRA3P34903 492 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 UGT2B15P54855 530 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 INHBCP55103 352 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 SERTAD2Q14140 314 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.61□□□□□ -0.874e-8■■■■□ 21.6
SMG6-213ENST00000573166 OGFOD2Q6N063 350 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 C6orf120Q7Z4R8 191 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 CEP19Q96LK0 163 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 C5orf34Q96MH7 638 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 PRRX2Q99811 253 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 CTRCQ99895 268 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 BHLHE41Q9C0J9 482 aaPredicted RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 ACSL6Q9UKU0 697 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 POLR1DQ9Y2S0 133 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 A0A096LPI6 279 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 SHISA7A6NL88 538 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 CHST10O43529 356 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 TPST2O60704 377 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 LDB3O75112 727 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 TSPAN12O95859 305 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 HOXB6P17509 224 aaKnown RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 XRCC1P18887 633 aaPredicted RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 GSTT1P30711 240 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 ZNF630Q2M218 657 aaPredicted RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 GGTA1PQ4G0N0 100 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 ZNF547Q8IVP9 402 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 TMEM151BQ8IW70 566 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 SMYD1Q8NB12 490 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 ZSCAN1Q8NBB4 408 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 C7orf57Q8NEG2 295 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 MTERF3Q96E29 417 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 COX14Q96I36 57 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 ARHGAP9Q9BRR9 750 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 METTL7AQ9H8H3 244 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 PLAC1Q9HBJ0 212 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 FSCN3Q9NQT6 498 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 VWA8A3KMH1 1905 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 FOXE1O00358 373 aaPredicted RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 NPPAP01160 153 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 GPIP06744 558 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 SAGP10523 405 aaPredicted RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 ST6GAL1P15907 406 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 RPS26P62854 115 aaKnown RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 REEP5Q00765 189 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 ERV3-1Q14264 604 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 GPR19Q15760 415 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 PLK5Q496M5 336 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 EIPR1Q53HC9 387 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 ZNF311Q5JNZ3 666 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 C3orf38Q5JPI3 329 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 C6orf132Q5T0Z8 1188 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 LARP4Q71RC2 724 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMG6-213ENST00000573166 ZDHHC21Q8IVQ6 265 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 SLC30A8Q8IWU4 369 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 SMPDL3BQ92485 455 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 SLC38A4Q969I6 547 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 MOAP1Q96BY2 351 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 TBC1D20Q96BZ9 403 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 GRIP2Q9C0E4 1043 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 SLC7A8Q9UHI5 535 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 C3orf18Q9UK00 162 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 TESMINQ9Y4I5 508 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 LYVE1Q9Y5Y7 322 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 FAM149AA5PLN7 773 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 GAPDHSO14556 408 aaPredicted RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 FLRT2O43155 660 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 OR12D1P0DN82 309 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 GFERP55789 205 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 POU6F2P78424 691 aaPredicted RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 ENPP2Q13822 863 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 MTX3Q5HYI7 312 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 KIAA1614Q5VZ46 1190 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 CCDC81Q6ZN84 652 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 B4GALNT2Q8NHY0 566 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMG6-213ENST00000573166 PHOSPHO1Q8TCT1 267 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 TMEM125Q96AQ2 219 aa9.6□□□□□ -0.87
SMG6-213ENST00000573166 METTL2AQ96IZ6 378 aaKnown RBP9.6□□□□□ -0.87
SMG6-213ENST00000573166 C4orf47A7E2U8 309 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 UBFD1O14562 309 aaKnown RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 FOLR3P41439 243 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 CAPZBP47756 277 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 TMED10P49755 219 aaKnown RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 SMU1Q2TAY7 513 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 WASH2PQ6VEQ5 465 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 PQLC1Q8N2U9 271 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 TANKQ92844 425 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 DUSP15Q9H1R2 295 aaPredicted RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 WASH6PQ9NQA3 447 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 IKZF3Q9UKT9 509 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 FAM186AA6NE01 2351 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 TNFRSF11BO00300 401 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 GNB5O14775 395 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 LSM1O15116 133 aaKnown RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 HOXC4P09017 264 aaPredicted RBP9.59□□□□□ -0.87
SMG6-213ENST00000573166 DDCP20711 480 aa9.59□□□□□ -0.87
SMG6-213ENST00000573166 BCL6P41182 706 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms