RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 MORN4Q8NDC4 146 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 MYRIPQ8NFW9 859 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 OR14A16Q8NHC5 309 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 SLC2A12Q8TD20 617 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 ZNF483Q8TF39 744 aaPredicted RBP16.07■□□□□ 0.16
SMG6-212ENST00000573153 MZB1Q8WU39 189 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMG6-212ENST00000573153 DAZLQ92904 295 aaKnown RBP16.07■□□□□ 0.16
SMG6-212ENST00000573153 RASL10BQ96S79 203 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 PSMC3IPQ9P2W1 217 aaPredicted RBP16.07■□□□□ 0.16
SMG6-212ENST00000573153 MYOTQ9UBF9 498 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 PHF11Q9UIL8 331 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 CENPEQ02224 2701 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 ITPR2Q14571 2701 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 A0A0G2JMM0 328 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 IQANK1A0A1B0GTG1 560 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 A0A1W2PPB8 328 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 A0A1W2PR48 441 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 A0A1W2PRS3 328 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 A8MT66 165 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 KIR3DP1A8MWS1 328 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 FCHO1O14526 889 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 ADAM10O14672 748 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 PROM1O43490 865 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 SLC19A2O60779 497 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 ZFAND5O76080 213 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 OR6B1O95007 311 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 RAP1GDS1P52306 607 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 ALDH6A1Q02252 535 aaKnown RBP16.06■□□□□ 0.16
SMG6-212ENST00000573153 STX4Q12846 297 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 CDSNQ15517 529 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 MAPKAPK3Q16644 382 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 GPR180Q86V85 440 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 C9orf40Q8IXQ3 194 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 ZFP62Q8NB50 900 aaPredicted RBP16.06■□□□□ 0.16
SMG6-212ENST00000573153 OR8K3Q8NH51 312 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 C16orf52Q8NHV5 167 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 PLSCR2Q9NRY7 297 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 LYARQ9NX58 379 aaKnown RBP16.06■□□□□ 0.16
SMG6-212ENST00000573153 TINAGQ9UJW2 476 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 FBN2P35556 2912 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 MYO7BQ6PIF6 2116 aa16.06■□□□□ 0.16
SMG6-212ENST00000573153 NPIPA5E9PKD4 350 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 OR2J2O76002 312 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 NADKO95544 446 aaPredicted RBP16.05■□□□□ 0.16
SMG6-212ENST00000573153 GSTA1P08263 222 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 CPN2P22792 545 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 PTGER1P34995 402 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 SOX3P41225 446 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 STT3AP46977 705 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 MEOX1P50221 254 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 CMPK2Q5EBM0 449 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 FRG2Q64ET8 278 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 NCCRP1Q6ZVX7 275 aaPredicted RBP16.05■□□□□ 0.16
SMG6-212ENST00000573153 CYP4Z2PQ8N1L4 340 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 TANKQ92844 425 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 FRG2BQ96QU4 278 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 SERPINI1Q99574 410 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 RPF2Q9H7B2 306 aaKnown RBP16.05■□□□□ 0.16
SMG6-212ENST00000573153 PPCSQ9HAB8 311 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 NPIPA1Q9UND3 350 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 YARS2Q9Y2Z4 477 aaKnown RBP16.05■□□□□ 0.16
SMG6-212ENST00000573153 HRH3Q9Y5N1 445 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 CLCA3PQ9Y6N3 262 aa16.05■□□□□ 0.16
SMG6-212ENST00000573153 TRGV8A0A0C4DH27 118 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 C17orf105B2RV13 164 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 ASNA1O43681 348 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 OTCP00480 354 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 ZNF24P17028 368 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 GRNP28799 593 aaKnown RBP16.04■□□□□ 0.16
SMG6-212ENST00000573153 TLX1P31314 330 aaPredicted RBP16.04■□□□□ 0.16
SMG6-212ENST00000573153 SOX18P35713 384 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 RFC3P40938 356 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 SSR4P51571 173 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 PER3P56645 1201 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 HERVK_113P63132 956 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 RNF4P78317 190 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 FOLH1Q04609 750 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 RASA2Q15283 850 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.04■□□□□ 0.16
SMG6-212ENST00000573153 KRTCAP3Q53RY4 240 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 LETMD1Q6P1Q0 360 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 TDRPQ86YL5 185 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 OR4F6Q8NGB9 312 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 SREK1Q8WXA9 508 aaKnown RBP16.04■□□□□ 0.16
SMG6-212ENST00000573153 ATP6V1E2Q96A05 226 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 CCDC77Q9BR77 488 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 ERVK-6Q9BXR3 956 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 OR8D2Q9GZM6 311 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 SH2D2AQ9NP31 389 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 TEX10Q9NXF1 929 aaPredicted RBP16.04■□□□□ 0.16
SMG6-212ENST00000573153 TMEM216Q9P0N5 145 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 ADAM29Q9UKF5 820 aa16.04■□□□□ 0.16
SMG6-212ENST00000573153 WWP2O00308 870 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 PEX1O43933 1283 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 AIFM1O95831 613 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 IFNA16P05015 189 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 TAC1P20366 129 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 BUD31P41223 144 aaPredicted RBP16.03■□□□□ 0.16
SMG6-212ENST00000573153 GPR85P60893 370 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms