RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 GFAPP14136 432 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 NTF4P34130 210 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 CD96P40200 585 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 MSH2P43246 934 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 SERPINB8P50452 374 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 SERPINB9P50453 376 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ALDH18A1P54886 795 aaKnown RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 LIM2P55344 173 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 HSD17B7P56937 341 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 RAB38P57729 211 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 TAS2R50P59544 299 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 SLC13A2Q13183 592 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 TUBA3CQ13748 450 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 RCN2Q14257 317 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 INAQ16352 499 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 AP5B1Q2VPB7 878 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ZNF766Q5HY98 468 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 UBAP2Q5T6F2 1119 aaKnown RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 SPINK14Q6IE38 97 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ADNP2Q6IQ32 1131 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 MED27Q6P2C8 311 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 TUBA3EQ6PEY2 450 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ZDHHC13Q8IUH4 622 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 CRLF3Q8IUI8 442 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ZNF595Q8IYB9 648 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 LAS2Q8IYD9 372 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 BEST3Q8N1M1 668 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 SLC5A8Q8N695 610 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 TEX9Q8N6V9 391 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 BCORP1Q8N888 145 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 CEP112Q8N8E3 955 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 NFAM1Q8NET5 270 aaPredicted RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 OR7G3Q8NG95 312 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 DNAJB8Q8NHS0 232 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ADAMTS18Q8TE60 1221 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ZNF473Q8WTR7 871 aaKnown RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 SLC44A1Q8WWI5 657 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 CMTM7Q96FZ5 175 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 GPR78Q96P69 363 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 TAAR6Q96RI8 345 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 NPAS2Q99743 824 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 UTP23Q9BRU9 249 aaKnown RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 TBCDQ9BTW9 1192 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 DEFB126Q9BYW3 111 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ROGDIQ9GZN7 287 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 VPS11Q9H270 941 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 COPS7BQ9H9Q2 264 aaPredicted RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 PRTFDC1Q9NRG1 225 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 PNO1Q9NRX1 252 aaKnown RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 OLAHQ9NV23 265 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ADGRE2Q9UHX3 823 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 DAPP1Q9UN19 280 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 SLC5A6Q9Y289 635 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 MRPS33Q9Y291 106 aaKnown RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 TNPO3Q9Y5L0 923 aaKnown RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 ACTL7BQ9Y614 415 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 RP1L1Q8IWN7 2480 aaPredicted RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 CNTRLQ7Z7A1 2325 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ESPL1Q14674 2120 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 A0A087WUV0 522 aaPredicted RBP6.94□□□□□ -1.3
NUP88-205ENST00000572809 WIPF3A6NGB9 483 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 SAGE2PA6NJ88 616 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 GABRR3A8MPY1 467 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 CYR61O00622 381 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 KLK8O60259 260 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 CTNSO60931 367 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 SH3BGRLO75368 114 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 KRT38O76015 456 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 CRYABP02511 175 aaKnown RBP6.94□□□□□ -1.3
NUP88-205ENST00000572809 RBP1P09455 135 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 NAT2P11245 290 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 CNTFP26441 200 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 CERS1P27544 350 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 ECHS1P30084 290 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 SERPINB1P30740 379 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 CLCN2P51788 898 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 OC90Q02509 493 aaPredicted RBP6.94□□□□□ -1.3
NUP88-205ENST00000572809 GTF2H2Q13888 395 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 PCBP2Q15366 365 aaKnown RBP eCLIP6.94□□□□□ -1.3
NUP88-205ENST00000572809 OR1C1Q15619 314 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 TMEM35AQ53FP2 167 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 DEPDC1Q5TB30 811 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 LGSNQ5TDP6 509 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 LIPJQ5W064 366 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 ZNF324BQ6AW86 544 aaPredicted RBP6.94□□□□□ -1.3
NUP88-205ENST00000572809 OR4C11Q6IEV9 310 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 GRHL2Q6ISB3 625 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 GTF2H2CQ6P1K8 395 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 METTL2BQ6P1Q9 378 aaKnown RBP6.94□□□□□ -1.3
NUP88-205ENST00000572809 Q6ZS46 218 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 UBE3DQ7Z6J8 389 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 MYLK4Q86YV6 388 aaPredicted RBP6.94□□□□□ -1.3
NUP88-205ENST00000572809 SCUBE1Q8IWY4 988 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 IFT20Q8IY31 132 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 LGI4Q8N135 537 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 PLD6Q8N2A8 252 aaKnown RBP6.94□□□□□ -1.3
NUP88-205ENST00000572809 KIF2BQ8N4N8 673 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 HORMAD2Q8N7B1 307 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 ACOT4Q8N9L9 421 aa6.94□□□□□ -1.3
NUP88-205ENST00000572809 FAM47BQ8NA70 645 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms