RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 NBASA2RRP1 2371 aa16.53■□□□□ 0.24
CTDNEP1-207ENST00000572043 A0A1W2PPM1 405 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 ASPDHA6ND91 283 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 SYNDIG1LA6NDD5 238 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 HRKO00198 91 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 ZNHIT1O43257 154 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 OR10H2O60403 315 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 OR4F21O95013 312 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 AIFM1O95831 613 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 KLK1P06870 262 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 STSP08842 583 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 STT3AP46977 705 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 HERVK_113P63132 956 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 PLIN5Q00G26 463 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 CLCQ05315 142 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 UNC50Q53HI1 259 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 TCHHL1Q5QJ38 904 aaPredicted RBP16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 ZNF678Q5SXM1 525 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 IL20RBQ6UXL0 311 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 MDGA2Q7Z553 956 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 SULF2Q8IWU5 870 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 ARMC10Q8N2F6 343 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 SELENOMQ8WWX9 145 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 ASB15Q8WXK1 588 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 RBM18Q96H35 190 aaKnown RBP16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 CNPPD1Q9BV87 410 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 ERVK-6Q9BXR3 956 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 TRIM45Q9H8W5 580 aaPredicted RBP16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 MYOTQ9UBF9 498 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 COPS7AQ9UBW8 275 aa16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 YARS2Q9Y2Z4 477 aaKnown RBP16.52■□□□□ 0.24
CTDNEP1-207ENST00000572043 WIPF3A6NGB9 483 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 A8MVJ9 347 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 OR6B1O95007 311 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 CLDN1O95832 211 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 PDYNP01213 254 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 ALOX15P16050 662 aaPredicted RBP16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 ZNF24P17028 368 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 ATP5F1P24539 256 aaPredicted RBP16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 COL8A1P27658 744 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 HSD17B3P37058 310 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 SOX3P41225 446 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 MEOX1P50221 254 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 HK2P52789 917 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 ARFIP1P53367 373 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 RNF4P78317 190 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 HSF1Q00613 529 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 GGTA1PQ4G0N0 100 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 RNFT1Q5M7Z0 435 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 CDYL2Q8N8U2 506 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 ZNF721Q8TF20 911 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 MZB1Q8WU39 189 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 SENP5Q96HI0 755 aaPredicted RBP16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 GPR137Q96N19 417 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 RASL10BQ96S79 203 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 C1QTNF3Q9BXJ4 246 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 WDR41Q9HAD4 459 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 HPF1Q9NWY4 346 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 TEX10Q9NXF1 929 aaPredicted RBP16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 PSD3Q9NYI0 1048 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 FETUBQ9UGM5 382 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 ZNF225Q9UK10 706 aa16.51■□□□□ 0.23
CTDNEP1-207ENST00000572043 SCN2AQ99250 2005 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 A0A1B0GUH1 482 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 A0A1W2PS29 197 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 G3V3Y1 287 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 CDK2AP1O14519 115 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 PGRMC2O15173 223 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 DYRK3O43781 588 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 PEX1O43933 1283 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 ZG16O60844 167 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 SEMA3DO95025 777 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 GPR75O95800 540 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 PER3P56645 1201 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 ERVK-8P63133 956 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 IGLV3-21P80748 117 aaPredicted RBP16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 RBPJQ06330 500 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 ZNF267Q14586 743 aaPredicted RBP16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 CCNYL2Q5T2Q4 361 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 OR5L2Q8NGL0 311 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 ACMSDQ8TDX5 336 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 EPS8L3Q8TE67 593 aaKnown RBP16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 AHSPQ9NZD4 102 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 TRPS1Q9UHF7 1281 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 SNX6Q9UNH7 406 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 ERVK-19Q9WJR5 959 aa16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 KLF13Q9Y2Y9 288 aaPredicted RBP16.5■□□□□ 0.23
CTDNEP1-207ENST00000572043 ZNF354AO60765 605 aaPredicted RBP16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 SLC19A2O60779 497 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 MLYCDO95822 493 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 KRT15P19012 456 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 ASPHQ12797 758 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 ZNF750Q32MQ0 723 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 OR52E8Q6IFG1 317 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 GPRIN3Q6ZVF9 776 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 COMMD6Q7Z4G1 85 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 LCA5Q86VQ0 697 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 SIAH3Q8IW03 269 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 C9orf40Q8IXQ3 194 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 EIF1ADQ8N9N8 165 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms