RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 SH3GL2Q99962 352 aa17.5■□□□□ 0.39
SCARF1-204ENST00000570902 CNOT10Q9H9A5 744 aaKnown RBP17.5■□□□□ 0.39
SCARF1-204ENST00000570902 PRDM7Q9NQW5 492 aa17.5■□□□□ 0.39
SCARF1-204ENST00000570902 ASIC3Q9UHC3 531 aa17.5■□□□□ 0.39
SCARF1-204ENST00000570902 AKAP6Q13023 2319 aa17.5■□□□□ 0.39
SCARF1-204ENST00000570902 AHRRA9YTQ3 701 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 CLGNO14967 610 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 ETHE1O95571 254 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 TSNQ15631 228 aaKnown RBP17.49■□□□□ 0.39
SCARF1-204ENST00000570902 C18orf21Q32NC0 220 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-204ENST00000570902 MAATS1Q7Z4T9 603 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 PDIK1LQ8N165 341 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 LRRC25Q8N386 305 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-204ENST00000570902 NEIL3Q8TAT5 605 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 SPACA9Q96E40 222 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-204ENST00000570902 PTCD3Q96EY7 689 aaKnown RBP17.49■□□□□ 0.39
SCARF1-204ENST00000570902 CFAP36Q96G28 342 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 CNIH4Q9P003 139 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 ZNF629Q9UEG4 869 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-204ENST00000570902 EML6Q6ZMW3 1958 aa17.49■□□□□ 0.39
SCARF1-204ENST00000570902 FLNAP21333 2647 aaKnown RBP17.48■□□□□ 0.39
SCARF1-204ENST00000570902 RFPL3SP0C7P2 107 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 KEAP1Q14145 624 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 DEFB113Q30KQ7 82 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 TRMT10BQ6PF06 316 aaKnown RBP17.48■□□□□ 0.39
SCARF1-204ENST00000570902 ADGRD1Q6QNK2 874 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 SEM1Q6ZVN7 128 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 CREG2Q8IUH2 290 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 KLHL7Q8IXQ5 586 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 C17orf53Q8N3J3 647 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-204ENST00000570902 SENP5Q96HI0 755 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-204ENST00000570902 VPS39Q96JC1 886 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 ART5Q96L15 291 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 DGAT2Q96PD7 388 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 F2RL3Q96RI0 385 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 TBCDQ9BTW9 1192 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 EFCAB11Q9BUY7 163 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 SLC6A15Q9H2J7 730 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 PLAC1Q9HBJ0 212 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 DNAJC11Q9NVH1 559 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCARF1-204ENST00000570902 ZNF490Q9ULM2 529 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-204ENST00000570902 SAR1BQ9Y6B6 198 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 ARHGAP21Q5T5U3 1957 aa17.48■□□□□ 0.39
SCARF1-204ENST00000570902 FAM95CA0A1B0GW59 222 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 TUBAL3A6NHL2 446 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 NCF1BA6NI72 391 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 NCF1CA8MVU1 366 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 ATE1O95260 518 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 EPPINO95925 133 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 NCF1P14598 390 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 TACR1P25103 407 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 CEACAM8P31997 349 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 TIMP3P35625 211 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 GGT5P36269 586 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 ELK3P41970 407 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 STT3AP46977 705 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 ID2Q02363 134 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 LTBQ06643 244 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 BIKQ13323 160 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 LAPTM5Q13571 262 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 FRG1Q14331 258 aaKnown RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 ZNF460Q14592 562 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 SF3B4Q15427 424 aaKnown RBP eCLIP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 TGFBIQ15582 683 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 HIST2H2ACQ16777 129 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 PAGE2BQ5JRK9 111 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 PRAMEF20Q5VT98 475 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 HIST2H2AA3Q6FI13 130 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 ZC3HC1Q86WB0 502 aaKnown RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 KIF18BQ86Y91 864 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 LACC1Q8IV20 430 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 C9orf40Q8IXQ3 194 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 ACOT4Q8N9L9 421 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 ANKRD9Q96BM1 317 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 LRRC39Q96DD0 335 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 WDR34Q96EX3 536 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 RBM18Q96H35 190 aaKnown RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 MAPKAP1Q9BPZ7 522 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 POPDC3Q9HBV1 291 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 WWOXQ9NZC7 414 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 CHMP2BQ9UQN3 213 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 HRNRQ86YZ3 2850 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-204ENST00000570902 DNHD1Q96M86 4753 aa17.47■□□□□ 0.39
SCARF1-204ENST00000570902 C15orf38-AP3S2A0A0A6YYH1 394 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 LRRC3CA6NJW4 275 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 GOSR1O95249 250 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 IL2RAP01589 272 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 IGKV3-11P04433 115 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 EPXP11678 715 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 ATP5A1P25705 553 aaKnown RBP17.46■□□□□ 0.39
SCARF1-204ENST00000570902 SERPINB3P29508 390 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 TAS2R39P59534 338 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 IGLV3-21P80748 117 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-204ENST00000570902 DOC2AQ14183 400 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 ACSF3Q4G176 576 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-204ENST00000570902 TMEM35AQ53FP2 167 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 HP1BP3Q5SSJ5 553 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-204ENST00000570902 STEAP4Q687X5 459 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 ADNP2Q6IQ32 1131 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms