RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 PCID2Q5JVF3 399 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 RBM20Q5T481 1227 aaKnown RBP6.53□□□□□ -1.36
SMG6-205ENST00000570659 ZNF704Q6ZNC4 412 aaPredicted RBP6.53□□□□□ -1.36
SMG6-205ENST00000570659 SYDE1Q6ZW31 735 aaPredicted RBP6.53□□□□□ -1.36
SMG6-205ENST00000570659 PLEKHM3Q6ZWE6 761 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 CILP2Q8IUL8 1156 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 ZNF441Q8N8Z8 693 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 LRRC57Q8N9N7 239 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 PPHLN1Q8NEY8 458 aaKnown RBP6.53□□□□□ -1.36
SMG6-205ENST00000570659 OR56A3Q8NH54 315 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 MS4A6EQ96DS6 147 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 HSPBAP1Q96EW2 488 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 SNF8Q96H20 258 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 LCORQ96JN0 433 aaPredicted RBP6.53□□□□□ -1.36
SMG6-205ENST00000570659 MAPKAP1Q9BPZ7 522 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 CCDC77Q9BR77 488 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 SORBS1Q9BX66 1292 aaKnown RBP6.53□□□□□ -1.36
SMG6-205ENST00000570659 ANGPTL4Q9BY76 406 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 ALOXE3Q9BYJ1 711 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 LACRTQ9GZZ8 138 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 SLCO5A1Q9H2Y9 848 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 RAB6BQ9NRW1 208 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 UTP6Q9NYH9 597 aaKnown RBP6.53□□□□□ -1.36
SMG6-205ENST00000570659 CHMP5Q9NZZ3 219 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 SAMD15Q9P1V8 674 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 VTI1BQ9UEU0 232 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 LAMP3Q9UQV4 416 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 EFR3BQ9Y2G0 817 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 C15orf41Q9Y2V0 281 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 DHRS7Q9Y394 339 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 MMACHCQ9Y4U1 282 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 PCNX3Q9H6A9 2034 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 CADP27708 2225 aa6.53□□□□□ -1.36
SMG6-205ENST00000570659 FREM1Q5H8C1 2179 aa6.52□□□□□ -1.36
SMG6-205ENST00000570659 GRID2IPA4D2P6 1211 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 LRRC14BA6NHZ5 514 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 FAM47E-STBD1D6RA91 191 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 GNB5O14775 395 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 TLX2O43763 284 aaPredicted RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 MFAP3LO75121 409 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 SH3BGRLO75368 114 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 HAUS5O94927 633 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 RCBTB2O95199 551 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 IFNA2P01563 188 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 APRTP07741 180 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 DANCRP0C864 163 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 ZNF16P17020 682 aaPredicted RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 FPR1P21462 350 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 TCEA1P23193 301 aaKnown RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 IGFBP5P24593 272 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 CFPP27918 469 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 PTPN6P29350 595 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 SLC1A2P43004 574 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 KIR2DL2P43627 348 aaPredicted RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 PLA2G16P53816 162 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 HSD17B7P56937 341 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 COPS2P61201 443 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 SIRPAP78324 504 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 ZNF844Q08AG5 666 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 SNX1Q13596 522 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 MPEG1Q2M385 716 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 P3H1Q32P28 736 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 NHSL2Q5HYW2 709 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 MEI1Q5TIA1 1274 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 ANKRD22Q5VYY1 191 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 FAM219BQ5XKK7 198 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 OPN5Q6U736 354 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 C20orf204Q6ZNR8 217 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 LINC00523Q86TU6 105 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 PRR22Q8IZ63 422 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 LIX1Q8N485 282 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 RNF175Q8N4F7 328 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 ZNF610Q8N9Z0 462 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 FAM83FQ8NEG4 500 aaPredicted RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 C1orf54Q8WWF1 131 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 FIG4Q92562 907 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 SENP5Q96HI0 755 aaPredicted RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 SGCZQ96LD1 299 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 RILPQ96NA2 401 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 RUNDC3BQ96NL0 473 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 TTC1Q99614 292 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 TMEM204Q9BSN7 226 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 DOHHQ9BU89 302 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 KIFC1Q9BW19 673 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 SFXN3Q9BWM7 321 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 CALHM2Q9HA72 323 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 ANAPC5Q9UJX4 755 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 PACSIN3Q9UKS6 424 aa6.52□□□□□ -1.37
SMG6-205ENST00000570659 BOKQ9UMX3 212 aaPredicted RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 MAGED1Q9Y5V3 778 aaPredicted RBP6.52□□□□□ -1.37
SMG6-205ENST00000570659 ZCWPW2A0A1B0GU75 182 aa6.51□□□□□ -1.37
SMG6-205ENST00000570659 LRIT2A6NDA9 550 aa6.51□□□□□ -1.37
SMG6-205ENST00000570659 E5RI56 91 aa6.51□□□□□ -1.37
SMG6-205ENST00000570659 PSMD12O00232 456 aaPredicted RBP6.51□□□□□ -1.37
SMG6-205ENST00000570659 CASKO14936 926 aa6.51□□□□□ -1.37
SMG6-205ENST00000570659 ERI3O43414 337 aaKnown RBP6.51□□□□□ -1.37
SMG6-205ENST00000570659 LIASO43766 372 aa6.51□□□□□ -1.37
SMG6-205ENST00000570659 ZBTB14O43829 449 aa6.51□□□□□ -1.37
SMG6-205ENST00000570659 NME6O75414 186 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms