RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 IPPKQ9H8X2 491 aa20.9■□□□□ 0.94
RBFOX1-219ENST00000569895 PSD3Q9NYI0 1048 aa20.9■□□□□ 0.94
RBFOX1-219ENST00000569895 IKBKGQ9Y6K9 419 aa20.9■□□□□ 0.94
RBFOX1-219ENST00000569895 ITPR2Q14571 2701 aa20.9■□□□□ 0.94
RBFOX1-219ENST00000569895 HMX2A2RU54 273 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 ZNHIT1O43257 154 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 FGF17O60258 216 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 URI1O94763 535 aaPredicted RBP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 ETHE1O95571 254 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 RBP1P09455 135 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 RPS13P62277 151 aaKnown RBP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 IGLV3-21P80748 117 aaPredicted RBP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 CPSF6Q16630 551 aaKnown RBP eCLIP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 WHAMMP3Q1A5X7 153 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 MPEG1Q2M385 716 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 NDUFAF5Q5TEU4 345 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 C3P1Q6ZMU1 363 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 FGD2Q7Z6J4 655 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 RELL1Q8IUW5 271 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 OR4N5Q8IXE1 308 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 ZNF321PQ8N8H1 164 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 OR52N2Q8NGI0 321 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 NUBPLQ8TB37 319 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 ZNF721Q8TF20 911 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 CA5BP1Q8WTZ4 195 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 ATP6V1E2Q96A05 226 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 DMRTA2Q96SC8 542 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 FAM173AQ9BQD7 235 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 PELOQ9BRX2 385 aaKnown RBP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 SORBS1Q9BX66 1292 aaKnown RBP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 DEPPQ9NTK1 212 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 RYDENQ9NUL5 291 aaKnown RBP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 LYARQ9NX58 379 aaKnown RBP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 CPSF2Q9P2I0 782 aaKnown RBP20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 TMCO1Q9UM00 188 aa20.89■□□□□ 0.93
RBFOX1-219ENST00000569895 PLPP1O14494 284 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 PDE9AO76083 593 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 P04436 131 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 INHBAP08476 426 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 ARL1P40616 181 aaPredicted RBP20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 TNFRSF17Q02223 184 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 CUL3Q13618 768 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 ZNF750Q32MQ0 723 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 CYP20A1Q6UW02 462 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 TAOK1Q7L7X3 1001 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 GOLGA7Q7Z5G4 137 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 CD163Q86VB7 1156 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 RNF175Q8N4F7 328 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 SCYL1Q96KG9 808 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 GPR78Q96P69 363 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 DEFB127Q9H1M4 99 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 TP63Q9H3D4 680 aaPredicted RBP20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 WDR41Q9HAD4 459 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 PLSCR2Q9NRY7 297 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 SACM1LQ9NTJ5 587 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 NINJ2Q9NZG7 142 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 ATG4BQ9Y4P1 393 aa20.88■□□□□ 0.93
RBFOX1-219ENST00000569895 FOXE1O00358 373 aaPredicted RBP20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 ADAM10O14672 748 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 PROM1O43490 865 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 CLDN9O95484 217 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 ALDOAP04075 364 aaKnown RBP20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 SNRPB2P08579 225 aaKnown RBP20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 ALOX15P16050 662 aaPredicted RBP20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 FOLH1Q04609 750 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 TBL3Q12788 808 aaKnown RBP20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 PIGGQ5H8A4 983 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 FAM47EQ6ZV65 393 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 ST13P4Q8IZP2 240 aaPredicted RBP20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 SLC15A4Q8N697 577 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 L3MBTL4Q8NA19 623 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 SLC22A8Q8TCC7 542 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 SREK1Q8WXA9 508 aaKnown RBP20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 SDCCAG3Q96C92 435 aa20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 DDX31Q9H8H2 851 aaKnown RBP20.87■□□□□ 0.93
RBFOX1-219ENST00000569895 IQANK1A0A1B0GTG1 560 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 OR10H2O60403 315 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 GPR75O95800 540 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 SERPINB9P50453 376 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 ASPHQ12797 758 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 C18orf63Q68DL7 685 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 MNS1Q8NEH6 495 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 SLC44A1Q8WWI5 657 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 PPWD1Q96BP3 646 aaKnown RBP20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 FBXL20Q96IG2 436 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 SERPINI1Q99574 410 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 FUT8Q9BYC5 575 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 TTTY12Q9BZ98 90 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 ZDHHC11Q9H8X9 412 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 IL1RL2Q9HB29 575 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 RNF11Q9Y3C5 154 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 CREBBPQ92793 2442 aa20.86■□□□□ 0.93
RBFOX1-219ENST00000569895 LRRC14BA6NHZ5 514 aa20.85■□□□□ 0.93
RBFOX1-219ENST00000569895 FAM166BA8MTA8 275 aa20.85■□□□□ 0.93
RBFOX1-219ENST00000569895 KRT38O76015 456 aa20.85■□□□□ 0.93
RBFOX1-219ENST00000569895 SIX3O95343 332 aaPredicted RBP20.85■□□□□ 0.93
RBFOX1-219ENST00000569895 IGKV3-11P04433 115 aa20.85■□□□□ 0.93
RBFOX1-219ENST00000569895 FAM58BPP0C7Q3 252 aa20.85■□□□□ 0.93
RBFOX1-219ENST00000569895 CCNG1P51959 295 aa20.85■□□□□ 0.93
RBFOX1-219ENST00000569895 HNRNPH2P55795 449 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms