RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 GPR22Q99680 433 aa12.18□□□□□ -0.46
SPG7-221ENST00000569720 CD244Q9BZW8 370 aa12.18□□□□□ -0.46
SPG7-221ENST00000569720 ACBD3Q9H3P7 528 aa12.18□□□□□ -0.46
SPG7-221ENST00000569720 LIN28AQ9H9Z2 209 aaKnown RBP12.18□□□□□ -0.46
SPG7-221ENST00000569720 MCCC2Q9HCC0 563 aa12.18□□□□□ -0.46
SPG7-221ENST00000569720 PRDM7Q9NQW5 492 aa12.18□□□□□ -0.46
SPG7-221ENST00000569720 COPS7AQ9UBW8 275 aa12.18□□□□□ -0.46
SPG7-221ENST00000569720 PTBP2Q9UKA9 531 aaKnown RBP12.18□□□□□ -0.46
SPG7-221ENST00000569720 MYOCOSA0A1B0GUC4 107 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 FAM166BA8MTA8 275 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 CXorf49A8MYA2 514 aaPredicted RBP12.17□□□□□ -0.46
SPG7-221ENST00000569720 C17orf105B2RV13 164 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 DYRK3O43781 588 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 KRT38O76015 456 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 ACSL3O95573 720 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 CNR1P21554 472 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 SERPINB1P30740 379 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 RAB10P61026 200 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 RNF4P78317 190 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 BIKQ13323 160 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 OR4D1Q15615 310 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 TMEM35AQ53FP2 167 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 ADNP2Q6IQ32 1131 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 OPN5Q6U736 354 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 RAPH1Q70E73 1250 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 CTAGE3PQ8IX95 158 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 ACOT4Q8N9L9 421 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 GOLM1Q8NBJ4 401 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 ACBD4Q8NC06 268 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 OR5M3Q8NGP4 307 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 LILRB4Q8NHJ6 448 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 STAG3L4Q8TBR4 150 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 SLC2A12Q8TD20 617 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 MTBPQ96DY7 904 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 SGCZQ96LD1 299 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 MAPKAP1Q9BPZ7 522 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 FAM173AQ9BQD7 235 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 MS4A8Q9BY19 250 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 TTTY12Q9BZ98 90 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 ZDHHC11Q9H8X9 412 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 KCNJ16Q9NPI9 418 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 SACM1LQ9NTJ5 587 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 DEPPQ9NTK1 212 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 RNF6Q9Y252 685 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 CELSR1Q9NYQ6 3014 aa12.17□□□□□ -0.46
SPG7-221ENST00000569720 EXOC1LA0A1B0GW35 172 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 OR14I1A6ND48 311 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 NPIPA2E9PIF3 369 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 NPIPA3F8WFD2 350 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 BCKDKO14874 412 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 PRAMEF4O60810 478 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 LDB3O75112 727 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 CDH16O75309 829 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 P04436 131 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 INHBAP08476 426 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 PCNAP12004 261 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 CD22P20273 847 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 CPN2P22792 545 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 ATP5A1P25705 553 aaKnown RBP12.16□□□□□ -0.46
SPG7-221ENST00000569720 CASP2P42575 452 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 SSR2P43308 183 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
SPG7-221ENST00000569720 ZNF750Q32MQ0 723 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 KBTBD12Q3ZCT8 623 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 GXYLT1Q4G148 440 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 PRAMEF9Q5VWM5 478 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 MED27Q6P2C8 311 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 ADGRD1Q6QNK2 874 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 ZNF793Q6ZN11 406 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 FAM47EQ6ZV65 393 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 TBC1D1Q86TI0 1168 aaPredicted RBP12.16□□□□□ -0.46
SPG7-221ENST00000569720 CDH24Q86UP0 819 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 MARVELD2Q8N4S9 558 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
SPG7-221ENST00000569720 SLC44A1Q8WWI5 657 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 SREK1Q8WXA9 508 aaKnown RBP12.16□□□□□ -0.46
SPG7-221ENST00000569720 CMTM7Q96FZ5 175 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 SCYL1Q96KG9 808 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 UBXN10Q96LJ8 280 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 SMC6Q96SB8 1091 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 TREX2Q9BQ50 279 aaPredicted RBP12.16□□□□□ -0.46
SPG7-221ENST00000569720 CENPKQ9BS16 269 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 ALG9Q9H6U8 611 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 IL1RL2Q9HB29 575 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 NMRAL1Q9HBL8 299 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 MS4A12Q9NXJ0 267 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 NUDT4Q9NZJ9 180 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 OPTCQ9UBM4 332 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 ADGRE2Q9UHX3 823 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 HRH3Q9Y5N1 445 aa12.16□□□□□ -0.46
SPG7-221ENST00000569720 PINLYPA6NC86 204 aa12.15□□□□□ -0.46
SPG7-221ENST00000569720 FIGNL2A6NMB9 653 aa12.15□□□□□ -0.46
SPG7-221ENST00000569720 FAM90A27PA6NNH2 459 aa12.15□□□□□ -0.46
SPG7-221ENST00000569720 SUPT3HB4E1H0 165 aa12.15□□□□□ -0.46
SPG7-221ENST00000569720 G3V3Y1 287 aa12.15□□□□□ -0.46
SPG7-221ENST00000569720 K7EPI3 171 aa12.15□□□□□ -0.46
SPG7-221ENST00000569720 RTCAO00442 366 aaKnown RBP12.15□□□□□ -0.46
SPG7-221ENST00000569720 SUPT3HO75486 399 aa12.15□□□□□ -0.46
SPG7-221ENST00000569720 TGFB1P01137 390 aa12.15□□□□□ -0.46
SPG7-221ENST00000569720 HIST1H1TP22492 207 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms