RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 KIAA1191Q96A73 305 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 PDLIM5Q96HC4 596 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 SIGLEC10Q96LC7 697 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 JSRP1Q96MG2 331 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 CNIH4Q9P003 139 aa10.85□□□□□ -0.67
GTF3C1-209ENST00000568569 ANKDD1BA6NHY2 528 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 KDM4EB2RXH2 506 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 H7C1Q1 480 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 DYRK3O43781 588 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 LDB3O75112 727 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 WDR47O94967 919 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 ETHE1O95571 254 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 AHSGP02765 367 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 COX7A2P14406 83 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 PGAM1P18669 254 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 CTSSP25774 331 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 GDF1P27539 372 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 OPRM1P35372 400 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 HNMTP50135 292 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 TGM3Q08188 693 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 CRYZQ08257 329 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 POU4F3Q15319 338 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 LYPD8Q6UX82 237 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 LRRC75A-AS1Q8N1F1 130 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 SLC15A4Q8N697 577 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 SIMC1Q8NDZ2 872 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 FAM13CQ8NE31 585 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 C7orf57Q8NEG2 295 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 OR10G3Q8NGC4 313 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 SMPDL3BQ92485 455 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 ZNF592Q92610 1267 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 ZNF597Q96LX8 424 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 DACH2Q96NX9 599 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 TIMP4Q99727 224 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 EGFL8Q99944 293 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 DOHHQ9BU89 302 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 PITHD1Q9GZP4 211 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 PRDM14Q9GZV8 571 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 PROK2Q9HC23 129 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 LYRM4Q9HD34 91 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 RYDENQ9NUL5 291 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 IKZF3Q9UKT9 509 aa10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 CORO1CQ9ULV4 474 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 CHCHD2Q9Y6H1 151 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-209ENST00000568569 FBN1P35555 2871 aaKnown RBP10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 CD8B2A6NJW9 211 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 CES2O00748 559 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 TTC4O95801 387 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 TBX6O95947 436 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 IL18BPO95998 194 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 IGKV3-11P04433 115 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 KCNC1P48547 511 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 PGGT1BP53609 377 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 PPP2R2BQ00005 443 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 CDKL1Q00532 357 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 ID2Q02363 134 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 TBCELQ5QJ74 424 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 FAM45BPQ6NSW5 357 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 C9orf40Q8IXQ3 194 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 CIARTQ8N365 385 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 VWA5B2Q8N398 1253 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 RASGEF1CQ8N431 466 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 NAT8LQ8N9F0 302 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 FAM45AQ8TCE6 357 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 NANOS1Q8WY41 292 aaKnown RBP10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 SENP5Q96HI0 755 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 DGAT2Q96PD7 388 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 KCNC2Q96PR1 638 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 PIP5K1AQ99755 562 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 ROGDIQ9GZN7 287 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 EPB41L4BQ9H329 900 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 NT5DC2Q9H857 520 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 JKAMPQ9P055 326 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 CAMK2AQ9UQM7 478 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 VWA7Q9Y334 891 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 SPACA6W5XKT8 324 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 ARID1AO14497 2285 aa10.83□□□□□ -0.68
GTF3C1-209ENST00000568569 ZANQ9Y493 2812 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 A0A1W2PPR1 153 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 MBD3L4A6NDZ8 208 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 MBD3L3A6NE82 208 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 NPEPPSL1A6NEC2 478 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 MBD3L5A6NJ08 208 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 SMPD2O60906 423 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 TRAPPC6AO75865 159 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 C1QAP02745 245 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 FBXO45P0C2W1 286 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 ZNF37AP17032 561 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 SERPINB3P29508 390 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 GDF5P43026 501 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 MSH2P43246 934 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 STT3AP46977 705 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 AGFG1P52594 562 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 SPANXN3Q5MJ09 141 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 TTC27Q6P3X3 843 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 PRSS57Q6UWY2 283 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 CAPN12Q6ZSI9 719 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 VN1R5Q7Z5H4 357 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 MBD3L2Q8NHZ7 208 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 ANKRD7Q92527 254 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms