RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 NRROSQ86YC3 692 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 EXD2Q9NVH0 621 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 ZSCAN32Q9NX65 697 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 APOBEC3BQ9UH17 382 aaKnown RBP17.18■□□□□ 0.34
SMPD3-211ENST00000568373 ATG4BQ9Y4P1 393 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 HSPE1-MOB4S4R3N1 261 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 LRP4O75096 1905 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 A0A1W2PR48 441 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 WASHC1A8K0Z3 465 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 SLC1A7O00341 560 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 HMGN4O00479 90 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 ZW10O43264 779 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 TFPTP0C1Z6 253 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 NTSP30990 170 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 RPS15AP62244 130 aaKnown RBP17.17■□□□□ 0.34
SMPD3-211ENST00000568373 CDK5R2Q13319 367 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 KIR2DS3Q14952 304 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 NEDD8Q15843 81 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 CYP27C1Q4G0S4 372 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 CLVS1Q8IUQ0 354 aaPredicted RBP17.17■□□□□ 0.34
SMPD3-211ENST00000568373 GIPC3Q8TF64 312 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 TMEM19Q96HH6 336 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 TUBA1CQ9BQE3 449 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 TWSG1Q9GZX9 223 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 CXorf21Q9HAI6 301 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 NDRG4Q9ULP0 352 aaKnown RBP17.17■□□□□ 0.34
SMPD3-211ENST00000568373 SH3GLB1Q9Y371 365 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 GMPPBQ9Y5P6 360 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 CCDC88CQ9P219 2028 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 GLOD5A6NK44 160 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 ZNF701M0R085 212 aaPredicted RBP17.17■□□□□ 0.34
SMPD3-211ENST00000568373 AXIN1O15169 862 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 DNAJB5O75953 348 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 CERS1P27544 350 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 PCSK6P29122 969 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 GPC1P35052 558 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 NCBP2P52298 156 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMPD3-211ENST00000568373 RAB8AP61006 207 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 SPIBQ01892 262 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 PRRT3Q5FWE3 981 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 RPS26P11Q5JNZ5 115 aaPredicted RBP17.17■□□□□ 0.34
SMPD3-211ENST00000568373 FLCNQ8NFG4 579 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 OR4C15Q8NGM1 316 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 FLVCR1-AS1Q8TAF5 88 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 RAB8BQ92930 207 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 ZNF566Q969W8 418 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 MSANTD3Q96H12 275 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 BBS4Q96RK4 519 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 APOL4Q9BPW4 351 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 SERHL2Q9H4I8 314 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 DNAH14Q0VDD8 3507 aa17.17■□□□□ 0.34
SMPD3-211ENST00000568373 TOR1BO14657 336 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 AIFM1O95831 613 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 IGHV4-34P06331 123 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 CCDC159P0C7I6 412 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 JUNBP17275 347 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-211ENST00000568373 EPHA2P29317 976 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 XCR1P46094 333 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 RABIFP47224 123 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 ILF3Q12906 894 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMPD3-211ENST00000568373 DUSP7Q16829 419 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 CWF19L1Q69YN2 538 aaKnown RBP17.16■□□□□ 0.34
SMPD3-211ENST00000568373 VN1R4Q7Z5H5 301 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 ABI3BPQ7Z7G0 1075 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 SLC44A2Q8IWA5 706 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-211ENST00000568373 OR13H1Q8NG92 308 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 CNIH3Q8TBE1 160 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 SGCDQ92629 289 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 ISOC1Q96CN7 298 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 C6orf106Q9H6K1 298 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-211ENST00000568373 FBXW2Q9UKT8 454 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 VCANP13611 3396 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 PRAMEF26H0Y7S4 382 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 PGRMC2O15173 223 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 TRMUO75648 421 aaKnown RBP17.16■□□□□ 0.34
SMPD3-211ENST00000568373 IGLV3-19P01714 112 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 IGFBP4P22692 258 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 CDH12P55289 794 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 TGM3Q08188 693 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 NPRL3Q12980 569 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 MAPK11Q15759 364 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 TSPYL5Q86VY4 417 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-211ENST00000568373 SLC22A18ASQ8N1D0 253 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 SLC35G5Q96KT7 338 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 FCRL4Q96PJ5 515 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 OR2A14Q96R47 310 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 PIP5K1AQ99755 562 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 GABARAPL3Q9BY60 117 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 NDRG2Q9UN36 371 aaKnown RBP17.16■□□□□ 0.34
SMPD3-211ENST00000568373 ENPP4Q9Y6X5 453 aa17.16■□□□□ 0.34
SMPD3-211ENST00000568373 OR2A25A4D2G3 310 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 E9PQ18 207 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 ERAL1O75616 437 aaKnown RBP17.15■□□□□ 0.34
SMPD3-211ENST00000568373 PDE9AO76083 593 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 ANGPTL1O95841 491 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 RECKO95980 971 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 HTR1AP08908 422 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 KCNC4Q03721 635 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 C18orf63Q68DL7 685 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 XAF1Q6GPH4 301 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms