RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 NCLNQ969V3 563 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 PSMG3-AS1Q96PY0 264 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 UTP23Q9BRU9 249 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 SORBS1Q9BX66 1292 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 DEFB126Q9BYW3 111 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 RPF2Q9H7B2 306 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 FARSBQ9NSD9 589 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 OXSMQ9NWU1 459 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 FBXW2Q9UKT8 454 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 CES1P1Q9UKY3 287 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 SNX6Q9UNH7 406 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 STK38LQ9Y2H1 464 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 YARS2Q9Y2Z4 477 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 SPTBN1Q01082 2364 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 USP9YO00507 2555 aaPredicted RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 LRRK2Q5S007 2527 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 FLNBO75369 2602 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 ANKUB1A6NFN9 424 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 WASHC1A8K0Z3 465 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 GABRR3A8MPY1 467 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 A8MUA0 341 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 FOXO6A8MYZ6 492 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 MANBAO00462 879 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 UBFD1O14562 309 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 PGRMC2O15173 223 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 PRKNO60260 465 aaPredicted RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 SH3BGRLO75368 114 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 OR4F21O95013 312 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 RASAL1O95294 804 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 ESRRBO95718 433 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 CRYABP02511 175 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 CLPSP04118 112 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 ENO1P06733 434 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 TUBBP07437 444 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 SLC35E2P0CK97 266 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 KRT4P19013 534 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 SOX18P35713 384 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 BUD31P41223 144 aaPredicted RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 CYB561P49447 251 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 RAP1GDS1P52306 607 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 RNF4P78317 190 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 FOLH1Q04609 750 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 STX4Q12846 297 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 LCP2Q13094 533 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 MRPL49Q13405 166 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 DDX39BQ13838 428 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 NR6A1Q15406 480 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 OR1C1Q15619 314 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 MPEG1Q2M385 716 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 TNFAIP8L3Q5GJ75 292 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 SPINK14Q6IE38 97 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 SLC25A25Q6KCM7 469 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 DGAT2L6Q6ZPD8 337 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 GPRIN3Q6ZVF9 776 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 PAGE2Q7Z2X7 111 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 TRIM46Q7Z4K8 759 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 CLNKQ7Z7G1 428 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 TRABD2AQ86V40 505 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 NUDT13Q86X67 352 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 HOMEZQ8IX15 550 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 HORMAD2Q8N7B1 307 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 GBP7Q8N8V2 638 aaPredicted RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 NUBPLQ8TB37 319 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 AGAP11Q8TF27 550 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 UCN3Q969E3 161 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 TM4SF18Q96CE8 201 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 NTNG2Q96CW9 530 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 MTFMTQ96DP5 389 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 SENP5Q96HI0 755 aaPredicted RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 METTL2AQ96IZ6 378 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 CNDP1Q96KN2 507 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 PELOQ9BRX2 385 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 PARD6BQ9BYG5 372 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 ELOVL6Q9H5J4 265 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 SH2D2AQ9NP31 389 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 PNO1Q9NRX1 252 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 NMRK1Q9NWW6 199 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 LRFN1Q9P244 771 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 MYOTQ9UBF9 498 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 VPS29Q9UBQ0 182 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 PLLPQ9Y342 182 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 CLCA3PQ9Y6N3 262 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 PCNX3Q9H6A9 2034 aa7.61□□□□□ -1.19
HDGFL3-205ENST00000568129 TRBV11-1A0A0K0K1C0 115 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 C17orf105B2RV13 164 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 FCHO1O14526 889 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 NME2P1O60361 137 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 ZNF354AO60765 605 aaPredicted RBP7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 SEMA7AO75326 666 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 ULK1O75385 1050 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 ITGA10O75578 1167 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 AIFM1O95831 613 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 KRT6AP02538 564 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 KRT6BP04259 564 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 KLK1P06870 262 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 STSP08842 583 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 NR2F6P10588 404 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 MYL2P10916 166 aa7.6□□□□□ -1.19
HDGFL3-205ENST00000568129 CD46P15529 392 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms