RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CLHC1Q8NHS4 586 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 ACTRT2Q8TDY3 377 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 TANKQ92844 425 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 TSSK3Q96PN8 268 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 EBF4Q9BQW3 602 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 FAIM2Q9BWQ8 316 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 WDR41Q9HAD4 459 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 FGFR1OP2Q9NVK5 253 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 P4HTMQ9NXG6 502 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 BAIAP2L1Q9UHR4 511 aa16.87■□□□□ 0.29
COMMD4-222ENST00000568034 IGHV1-45A0A0A0MS14 117 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 MYOCOSA0A1B0GUC4 107 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 MASP2O00187 686 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 PCDH17O14917 1159 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 ZZEF1O43149 2961 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 DRD2P14416 443 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 DDCP20711 480 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 IDH3AP50213 366 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 AQP5P55064 265 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 DIO3P55073 304 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 CXADRP78310 365 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 PTGR1Q14914 329 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 IKBIPQ70UQ0 350 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 CPEB2Q7Z5Q1 589 aaKnown RBP16.86■□□□□ 0.29
COMMD4-222ENST00000568034 LIX1Q8N485 282 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 ZSCAN1Q8NBB4 408 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 RFWD2Q8NHY2 731 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 CDC26Q8NHZ8 85 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 METTL21AQ8WXB1 218 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 THAP4Q8WY91 577 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 FBXL4Q9UKA2 621 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 WBP11Q9Y2W2 641 aaKnown RBP16.86■□□□□ 0.29
COMMD4-222ENST00000568034 LOC400499M0QZD8 3231 aa16.86■□□□□ 0.29
COMMD4-222ENST00000568034 CACNA1GO43497 2377 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 DIAPH2O60879 1101 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 GPR75O95800 540 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 G6PDP11413 515 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 PRPS2P11908 318 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 MAPK1P28482 360 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 C2orf80Q0P641 193 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 MAD2L1Q13257 205 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-222ENST00000568034 HEPACAMQ14CZ8 416 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 ZNF750Q32MQ0 723 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 LSM12Q3MHD2 195 aaKnown RBP16.85■□□□□ 0.29
COMMD4-222ENST00000568034 SFT2D3Q587I9 215 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 CPZQ66K79 652 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 TMEM132CQ8N3T6 1108 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 STON2Q8WXE9 905 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 THOC1Q96FV9 657 aaKnown RBP16.85■□□□□ 0.29
COMMD4-222ENST00000568034 IP6K3Q96PC2 410 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 ALOXE3Q9BYJ1 711 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 ZNF700Q9H0M5 742 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 PRORYQ9H606 182 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 KCNK13Q9HB14 408 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 NPHS2Q9NP85 383 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 NOP53Q9NZM5 478 aaKnown RBP16.85■□□□□ 0.29
COMMD4-222ENST00000568034 EHD3Q9NZN3 535 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 C19orf25Q9UFG5 118 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-222ENST00000568034 POLHQ9Y253 713 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 MED13Q9UHV7 2174 aa16.85■□□□□ 0.29
COMMD4-222ENST00000568034 VIMP08670 466 aaKnown RBP16.84■□□□□ 0.29
COMMD4-222ENST00000568034 ALDH9A1P49189 494 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 DUSP2Q05923 314 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 PDE7AQ13946 482 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 SERTAD2Q14140 314 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 DEFB109BQ30KR1 87 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 TMEM198Q66K66 360 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 DGAT2L6Q6ZPD8 337 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 TICAM1Q8IUC6 712 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 NUDT8Q8WV74 236 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 GFM2Q969S9 779 aaKnown RBP16.84■□□□□ 0.29
COMMD4-222ENST00000568034 CNRIP1Q96F85 164 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-222ENST00000568034 ZNF764Q96H86 408 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-222ENST00000568034 IMMP1LQ96LU5 166 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 ZNF681Q96N22 645 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 AIG1Q9NVV5 245 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 UTS2RQ9UKP6 389 aa16.84■□□□□ 0.29
COMMD4-222ENST00000568034 EIF3LQ9Y262 564 aaKnown RBP16.84■□□□□ 0.29
COMMD4-222ENST00000568034 ANKRD28O15084 1053 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 TBX19O60806 448 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 SEC24DO94855 1032 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-222ENST00000568034 LRATO95237 230 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 HPP00738 406 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 ASMTP46597 345 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 STT3AP46977 705 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 OR4D2P58180 307 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 Q0VFX4 171 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 STX4Q12846 297 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 CEBPEQ15744 281 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 ZNF385BQ569K4 471 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 DCAF10Q5QP82 559 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 FAM180BQ6P0A1 224 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 PAPD4Q6PIY7 484 aaKnown RBP16.83■□□□□ 0.28
COMMD4-222ENST00000568034 NDUFAF7Q7L592 441 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 SPATA19Q7Z5L4 167 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 RIMKLAQ8IXN7 391 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 PARP9Q8IXQ6 854 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 NFAM1Q8NET5 270 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-222ENST00000568034 OR4K14Q8NGD5 310 aa16.83■□□□□ 0.28
COMMD4-222ENST00000568034 CEP70Q8NHQ1 597 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms