RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CFAP61Q8NHU2 1237 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 DCAKDQ8WVC6 231 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 SLC44A1Q8WWI5 657 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 ASB15Q8WXK1 588 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 QRFPRQ96P65 431 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 CPNE1Q99829 537 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 DPH7Q9BTV6 452 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 ACBD3Q9H3P7 528 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 ESRP2Q9H6T0 727 aaKnown RBP8.93□□□□□ -0.98
CAPN3-216ENST00000567071 TXNDC16Q9P2K2 825 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 PSMC3IPQ9P2W1 217 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-216ENST00000567071 SPRR3Q9UBC9 169 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 FBXO5Q9UKT4 447 aa8.93□□□□□ -0.98
CAPN3-216ENST00000567071 YARS2Q9Y2Z4 477 aaKnown RBP8.93□□□□□ -0.98
CAPN3-216ENST00000567071 MED12Q93074 2177 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 HEATR5BQ9P2D3 2071 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 IGLV3-16A0A075B6K0 115 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 TRBV11-1A0A0K0K1C0 115 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 FEZF1A0PJY2 475 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 SAGE2PA6NJ88 616 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 G3V3Y1 287 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 NRP2O60462 931 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 LMX1BO60663 402 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 CDC123O75794 336 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 CELA3AP09093 270 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 TMIGD3P0DMS9 266 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 GABRB3P28472 473 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 CPOXP36551 454 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 GP5P40197 560 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 CLCN2P51788 898 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 ACTG1P63261 375 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 DBN1Q16643 649 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 TYSND1Q2T9J0 566 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 TMEM249Q2WGJ8 235 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 AARS2Q5JTZ9 985 aaKnown RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 RBM20Q5T481 1227 aaKnown RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 NSUN5P2Q63ZY6 315 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 KIAA0408Q6ZU52 694 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 CYS1Q717R9 158 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 SDCCAG8Q86SQ7 713 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 SERPINA9Q86WD7 417 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 GABPB2Q8TAK5 448 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 IGFBPL1Q8WX77 278 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 TSLPQ969D9 159 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 GTPBP3Q969Y2 492 aaKnown RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 VPS39Q96JC1 886 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 NDNQ99608 321 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 RBBP8Q99708 897 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 C19orf43Q9BQ61 176 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 RHNO1Q9BSD3 238 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 TMEM109Q9BVC6 243 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 ANGPTL4Q9BY76 406 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 ROPN1BQ9BZX4 212 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 ROPN1Q9HAT0 212 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-216ENST00000567071 KLHL28Q9NXS3 571 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 NSMCE4AQ9NXX6 385 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 FETUBQ9UGM5 382 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 CRYL1Q9Y2S2 319 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 SCN3AQ9NY46 2000 aa8.92□□□□□ -0.98
CAPN3-216ENST00000567071 C15orf38-AP3S2A0A0A6YYH1 394 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 TRBV5-4A0A0C4DH59 114 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 SLC5A10A0PJK1 596 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 GOLGA6L10A6NI86 522 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 TRIM49D1C9J1S8 452 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 RGS16O15492 202 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-216ENST00000567071 SIAH2O43255 324 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 OR1I1O60431 355 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 CDH16O75309 829 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 NDUFS3O75489 264 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 HAUS5O94927 633 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 AHSGP02765 367 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 P04436 131 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 MYZAPP0CAP1 466 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 ENDOUP21128 410 aaKnown RBP8.91□□□□□ -0.98
CAPN3-216ENST00000567071 SAT1P21673 171 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 JAK1P23458 1154 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 ACRV1P26436 265 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 ACVR1BP36896 505 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 TTPAP49638 278 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 CSE1LP55060 971 aaKnown RBP8.91□□□□□ -0.98
CAPN3-216ENST00000567071 RHAGQ02094 409 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 PRR31Q5SQ13 230 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 MROH9Q5TGP6 573 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 CYB5R2Q6BCY4 276 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 ABHD17CQ6PCB6 329 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 SUSD1Q6UWL2 747 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 IL20RBQ6UXL0 311 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.91□□□□□ -0.98
CAPN3-216ENST00000567071 MILR1Q7Z6M3 343 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 ZC3HC1Q86WB0 502 aaKnown RBP8.91□□□□□ -0.98
CAPN3-216ENST00000567071 TDRPQ86YL5 185 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 LMNTD2Q8IXW0 634 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 DEPDC4Q8N2C3 294 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 RIBC1Q8N443 379 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-216ENST00000567071 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-216ENST00000567071 GOLGA6L1Q8N7Z2 621 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 GPATCH11Q8N954 259 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 NEIL3Q8TAT5 605 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 LPGAT1Q92604 370 aa8.91□□□□□ -0.98
CAPN3-216ENST00000567071 ART5Q96L15 291 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms