RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 POMZP3Q6PJE2 187 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 KRT78Q8N1N4 520 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 OR10G3Q8NGC4 313 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 OR5L2Q8NGL0 311 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 LINC01560Q8TB33 94 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 RNASE6Q93091 150 aaKnown RBP14.25□□□□□ -0.13
PALB2-205ENST00000567003 PPWD1Q96BP3 646 aaKnown RBP14.25□□□□□ -0.13
PALB2-205ENST00000567003 ZFP64Q9NPA5 681 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 COPS7AQ9UBW8 275 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 CORO1CQ9ULV4 474 aaPredicted RBP14.25□□□□□ -0.13
PALB2-205ENST00000567003 ANK3Q12955 4377 aaKnown RBP14.25□□□□□ -0.13
PALB2-205ENST00000567003 C15orf38-AP3S2A0A0A6YYH1 394 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 FAM47E-STBD1D6RA91 191 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 DVL2O14641 736 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 DNALI1O14645 258 aaPredicted RBP14.24□□□□□ -0.13
PALB2-205ENST00000567003 TAPBPO15533 448 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 FGF17O60258 216 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 ELK3P41970 407 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 HNMTP50135 292 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 AGFG1P52594 562 aaKnown RBP14.24□□□□□ -0.13
PALB2-205ENST00000567003 TAS2R39P59534 338 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 CDKL1Q00532 357 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 EFTUD2Q15029 972 aaKnown RBP eCLIP14.24□□□□□ -0.134e-10■■■□□ 17.8
PALB2-205ENST00000567003 POU4F3Q15319 338 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 SLC22A10Q63ZE4 541 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 TMEM198Q66K66 360 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 ZNF662Q6ZS27 426 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 CAMKMTQ7Z624 323 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 KRTAP1-3Q8IUG1 177 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 FBXW8Q8N3Y1 598 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 LIX1Q8N485 282 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 SPATA6LQ8N4H0 392 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 SNX31Q8N9S9 440 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 FAM13CQ8NE31 585 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 NEIL3Q8TAT5 605 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 PAQR8Q8TEZ7 354 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 SORBS1Q9BX66 1292 aaKnown RBP14.24□□□□□ -0.13
PALB2-205ENST00000567003 NT5DC2Q9H857 520 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 CTNNAL1Q9UBT7 734 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 ASIC3Q9UHC3 531 aa14.24□□□□□ -0.13
PALB2-205ENST00000567003 BOKQ9UMX3 212 aaPredicted RBP14.24□□□□□ -0.13
PALB2-205ENST00000567003 TLN2Q9Y4G6 2542 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 FAM95CA0A1B0GW59 222 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 SAP18O00422 153 aaKnown RBP14.23□□□□□ -0.13
PALB2-205ENST00000567003 CLGNO14967 610 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 PRKRAO75569 313 aaKnown RBP14.23□□□□□ -0.13
PALB2-205ENST00000567003 ATP5A1P25705 553 aaKnown RBP14.23□□□□□ -0.13
PALB2-205ENST00000567003 CEACAM8P31997 349 aaPredicted RBP14.23□□□□□ -0.13
PALB2-205ENST00000567003 HSPA7P48741 367 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 ZNF136P52737 540 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 SERTAD2Q14140 314 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 KEAP1Q14145 624 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 DOC2AQ14183 400 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 RCN2Q14257 317 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 MPEG1Q2M385 716 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 CHSY3Q70JA7 882 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 ADAMTSL2Q86TH1 951 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 BIVMQ86UB2 503 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 LRRC25Q8N386 305 aaPredicted RBP14.23□□□□□ -0.13
PALB2-205ENST00000567003 NKAPQ8N5F7 415 aaKnown RBP14.23□□□□□ -0.13
PALB2-205ENST00000567003 SLC22A8Q8TCC7 542 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 SPACA9Q96E40 222 aaPredicted RBP14.23□□□□□ -0.13
PALB2-205ENST00000567003 SENP5Q96HI0 755 aaPredicted RBP14.23□□□□□ -0.13
PALB2-205ENST00000567003 GAL3ST4Q96RP7 486 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 EPB41L4BQ9H329 900 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 LYRM4Q9HD34 91 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 PRM3Q9NNZ6 103 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 DNAJC11Q9NVH1 559 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 WWOXQ9NZC7 414 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 DOCK7Q96N67 2140 aa14.23□□□□□ -0.13
PALB2-205ENST00000567003 PGRMC1O00264 195 aaKnown RBP14.22□□□□□ -0.13
PALB2-205ENST00000567003 IGKV3-11P04433 115 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 GDF1P27539 372 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 GSTM2P28161 218 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 MSH2P43246 934 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 KCNC1P48547 511 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 DUSP8Q13202 625 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 DAZAP2Q15038 168 aaPredicted RBP14.22□□□□□ -0.13
PALB2-205ENST00000567003 TGFBIQ15582 683 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 FBXL19-AS1Q494R0 122 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 STEAP4Q687X5 459 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 BICRALQ6AI39 1079 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 TMEM64Q6YI46 380 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 ZC3HC1Q86WB0 502 aaKnown RBP14.22□□□□□ -0.13
PALB2-205ENST00000567003 ANKMY2Q8IV38 441 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 VWA5B2Q8N398 1253 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 ACOT4Q8N9L9 421 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 NUBPLQ8TB37 319 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 PBKQ96KB5 322 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 DGAT2Q96PD7 388 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 KCNC2Q96PR1 638 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 NAT9Q9BTE0 207 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 MS4A8Q9BY19 250 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 PLEKHF2Q9H8W4 249 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 CNOT11Q9UKZ1 510 aaKnown RBP14.22□□□□□ -0.13
PALB2-205ENST00000567003 EDARQ9UNE0 448 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 CHCHD2Q9Y6H1 151 aaPredicted RBP14.22□□□□□ -0.13
PALB2-205ENST00000567003 ZANQ9Y493 2812 aa14.22□□□□□ -0.13
PALB2-205ENST00000567003 A0A1W2PPR1 153 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms