RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 H3BMH7 237 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 FPGTO14772 594 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 PLSCR1O15162 318 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ARHGEF9O43307 516 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 KCNAB3O43448 404 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 AKR7A2O43488 359 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 BUD23O43709 281 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 OR1F1O43749 312 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC28A2O43868 658 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 FCMRO60667 390 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 JAK2O60674 1132 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CDH16O75309 829 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 SAP30O75446 220 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 GOT2P00505 430 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CSTAP01040 98 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CYP1A2P05177 515 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ALPIP09923 528 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CT45A8P0DMV1 189 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CT45A9P0DMV2 189 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 DBTP11182 482 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 MYOD1P15172 320 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 C21orf33P30042 268 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 HSD17B2P37059 387 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 OR3A3P47888 321 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 GLIPR1P48060 266 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 PPT1P50897 306 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 TPMTP51580 245 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 AP3M2P53677 418 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 HSPA2P54652 639 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 BNC1Q01954 994 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 GHRHRQ02643 423 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 LIPEQ05469 1076 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 HYAL1Q12794 435 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ITGA9Q13797 1035 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CEACAM7Q14002 265 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 HNF4GQ14541 408 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ELAVL3Q14576 367 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 OPCMLQ14982 345 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 TATDN3Q17R31 274 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ITPRIPL2Q3MIP1 535 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF528Q3MIS6 628 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CT45A2Q5DJT8 189 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 FSCBQ5H9T9 825 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 SPANXN2Q5MJ10 180 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 LRRC66Q68CR7 880 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM225Q6GV28 225 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 OR4C11Q6IEV9 310 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 KIAA1161Q6NSJ0 714 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CWC27Q6UX04 472 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CEACAM20Q6UY09 585 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CCNI2Q6ZMN8 369 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 Q6ZPB1 254 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 IL17RELQ6ZVW7 336 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 P4HA3Q7Z4N8 544 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 C5orf24Q7Z6I8 188 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CBWD2Q8IUF1 395 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 VRK3Q8IV63 474 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CNGA4Q8IV77 575 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CHERPQ8IWX8 916 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ODF3L1Q8IXM7 274 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ZC3H3Q8IXZ2 948 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 KATNAL2Q8IYT4 538 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF683Q8IZ20 524 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 EID3Q8N140 333 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 PARP8Q8N3A8 854 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CLIP4Q8N3C7 705 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 PRSS35Q8N3Z0 413 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 DNAJC22Q8N4W6 341 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 RELL2Q8NC24 303 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 DDHD1Q8NEL9 900 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 SPATA4Q8NEY3 305 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 OR13C5Q8NGS8 318 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 WFIKKN2Q8TEU8 576 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM255BQ8WV15 326 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 TMEM37Q8WXS4 190 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 EMG1Q92979 244 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 LRRC39Q96DD0 335 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 C3orf30Q96M34 536 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 C12orf66Q96MD2 445 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 RPRD1AQ96P16 312 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 AGAP3Q96P47 875 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 NEDD4LQ96PU5 975 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 MAP3K3Q99759 626 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 BPIFA3Q9BQP9 254 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CHRDL1Q9BU40 450 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 WRAP53Q9BUR4 548 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 TRIM9Q9C026 710 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 SLC26A1Q9H2B4 701 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ARRDC1-AS1Q9H2J1 176 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 DHX33Q9H6R0 707 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 SUDS3Q9H7L9 328 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 CYP3A43Q9HB55 503 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 NEK6Q9HC98 313 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 RAVER2Q9HCJ3 691 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 KRCC1Q9NPI7 259 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 EXOC1Q9NV70 894 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 SPHK1Q9NYA1 384 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 HACD3Q9P035 362 aa3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 ZNF346Q9UL40 294 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-211ENST00000566550 KCNS2Q9ULS6 477 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms