RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 STSP08842 583 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 STAG3L3P0CL85 134 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 FDXRP22570 491 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RPS19P39019 145 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 AFF3P51826 1226 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 SOWAHCQ53LP3 525 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 PCID2Q5JVF3 399 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 NETO2Q8NC67 525 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 C2orf15Q8WU43 125 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 FAM193BQ96PV7 902 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 OMDQ99983 421 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 GPN1Q9HCN4 374 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 PAK6Q9NQU5 681 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZNF226Q9NYT6 803 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 FBXL3Q9UKT7 428 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ANGPT4Q9Y264 503 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 EXOGQ9Y2C4 368 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 CITO14578 2027 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 BCORQ6W2J9 1755 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MEIS3P2A8K0S8 358 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PRSS47A8MTI9 375 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CLIC1O00299 241 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PGRMC2O15173 223 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 LGI1O95970 557 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 C9P02748 559 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 NMBP08949 121 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 IGFBP5P24593 272 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 JAG1P78504 1218 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZNF169Q14929 603 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 FAM98BQ52LJ0 330 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 PRR5LQ6MZQ0 368 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PARGQ86W56 976 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 LRRC17Q8N6Y2 441 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CLDN22Q8N7P3 220 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 OR52N1Q8NH53 320 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 THAP3Q8WTV1 239 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 PCNPQ8WW12 178 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 AGAP2Q99490 1192 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 GAS2L1Q99501 681 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 GPR20Q99678 358 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 GABARAPL3Q9BY60 117 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CEP41Q9BYV8 373 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PCED1AQ9H1Q7 454 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 C3orf14Q9HBI5 128 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MYOZ2Q9NPC6 264 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SMPD4Q9NXE4 827 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DPP3Q9NY33 737 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 KIF25Q9UIL4 384 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CA5BQ9Y2D0 317 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 OARD1Q9Y530 152 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 NUMA1Q14980 2115 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TRAV19A0A0A6YYK7 116 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 GTPBP1O00178 669 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 NOBOXO60393 691 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 EIF1BO60739 113 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 VPS26AO75436 327 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 LY86O95711 162 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PTPN3P26045 913 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CSKP41240 450 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 EIF1P41567 113 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 AGFG1P52594 562 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 KIAA1614Q5VZ46 1190 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DEF8Q6ZN54 512 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RASAL3Q86YV0 1011 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DCBLD1Q8N8Z6 715 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 OR4Q3Q8NH05 313 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ADAMTS18Q8TE60 1221 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ING5Q8WYH8 240 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SEC22CQ9BRL7 303 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ALG2Q9H553 416 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DDX4Q9NQI0 724 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 ADAM30Q9UKF2 790 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 A0A1W2PPL8 197 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SUPT3HB4E1H0 165 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PPEF2O14830 753 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TRBC1P01850 177 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CYBBP04839 570 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PSAPP07602 524 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SLC19A1P41440 591 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PCP4P48539 62 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TCTAP57738 103 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SEC23BQ15437 767 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 MFSD14CQ5VZR4 134 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GPR149Q86SP6 731 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 JAZF1Q86VZ6 243 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GMCL1P1Q8NEA9 526 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CHTF18Q8WVB6 975 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SLC47A1Q96FL8 570 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RBM14Q96PK6 669 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 PAPOLGQ9BWT3 736 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 SUCNR1Q9BXA5 334 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 HAPLN2Q9GZV7 340 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SLAMF7Q9NQ25 335 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ARHGEF33A8MVX0 844 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CILPO75339 1184 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 JMJD7P0C870 316 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ACSM2AQ08AH3 577 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TMEM44Q2T9K0 475 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ARHGAP15Q53QZ3 475 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ANKRD39Q53RE8 183 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms