RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 PCDHGA1Q9Y5H4 931 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF780BQ9Y6R6 833 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 KIF26BQ2KJY2 2108 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 A0A1B0GX78 115 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 CIB2O75838 187 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 ZCCHC18P0CG32 403 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 MTPNP58546 118 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 MAT1AQ00266 395 aaKnown RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 TRIP6Q15654 476 aaKnown RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 RUNDC3AQ59EK9 446 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 BPHLQ86WA6 291 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 PPP1R3BQ86XI6 285 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 HPS6Q86YV9 775 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 TMEM126BQ8IUX1 230 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 SAMD14Q8IZD0 417 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 CCDC124Q96CT7 223 aaKnown RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 CNRIP1Q96F85 164 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 PHF12Q96QT6 1004 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 AKAP7Q9P0M2 348 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF282Q9UDV7 671 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 SLC7A8Q9UHI5 535 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 ERVK-11Q9UQG0 969 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 MRPS33Q9Y291 106 aaKnown RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 MAU2Q9Y6X3 613 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 FER1L5A0AVI2 2057 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 RIF1Q5UIP0 2472 aaKnown RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 SPEGQ15772 3267 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF292O60281 2723 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 ZFHX2Q9C0A1 2572 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-213ENST00000565834 MYO1GB0I1T2 1018 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 FAM227AF5H4B4 570 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 CSNK2A2P19784 350 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-213ENST00000565834 NCBP2P52298 156 aaKnown RBP eCLIP17.66■□□□□ 0.422e-6■■□□□ 13
COMMD4-213ENST00000565834 INSM1Q01101 510 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-213ENST00000565834 MLC1Q15049 377 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF551Q7Z340 670 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-213ENST00000565834 SHISA5Q8N114 240 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 TRIML2Q8N7C3 387 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 FAM13CQ8NE31 585 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 OR4K14Q8NGD5 310 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 TANKQ92844 425 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 AURKBQ96GD4 344 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-213ENST00000565834 PEX11GQ96HA9 241 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 AMDHD1Q96NU7 426 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 CPPED1Q9BRF8 314 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-213ENST00000565834 THUMPD3Q9BV44 507 aaKnown RBP17.66■□□□□ 0.42
COMMD4-213ENST00000565834 NEUROD4Q9HD90 331 aa17.66■□□□□ 0.42
COMMD4-213ENST00000565834 TMEM184BQ9Y519 407 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-213ENST00000565834 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-213ENST00000565834 BLACEA4D250 179 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 PRORSD1PA6NEY8 169 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 SCRG1O75711 98 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 C8orf89P0DMQ9 161 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 ME2P23368 584 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 FEN1P39748 380 aaKnown RBP17.65■□□□□ 0.42
COMMD4-213ENST00000565834 OR1D4P47884 311 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 HSPB3Q12988 150 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 GAB1Q13480 694 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 SELPLGQ14242 412 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 IL11RAQ14626 422 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 SYT16Q17RD7 645 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 RHBDD2Q6NTF9 364 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 TMEM52Q8NDY8 209 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 OR51Q1Q8NH59 317 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 RBCK1Q9BYM8 510 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 STRADBQ9C0K7 418 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 GLIPR2Q9H4G4 154 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 TOR4AQ9NXH8 423 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 CD300AQ9UGN4 299 aa17.65■□□□□ 0.42
COMMD4-213ENST00000565834 EVPLLA8MZ36 301 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 TMX2-CTNND1H3BSU7 103 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 SORBS2O94875 1100 aaKnown RBP17.64■□□□□ 0.42
COMMD4-213ENST00000565834 FGF5P12034 268 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 FBLP22087 321 aaKnown RBP17.64■□□□□ 0.42
COMMD4-213ENST00000565834 MPIP34949 423 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 SOAT1P35610 550 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 XKP51811 444 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 EEFSECP57772 596 aaKnown RBP17.64■□□□□ 0.42
COMMD4-213ENST00000565834 DSG2Q14126 1118 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 CEBPEQ15744 281 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF750Q32MQ0 723 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 SPATS1Q496A3 300 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 C1orf189Q5VU69 101 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 PWWP2BQ6NUJ5 590 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 GLRX5Q86SX6 157 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 BMPERQ8N8U9 685 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 COL26A1Q96A83 441 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF681Q96N22 645 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 CMKLR1Q99788 373 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 IKZF5Q9H5V7 419 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF304Q9HCX3 659 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 APMAPQ9HDC9 416 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 AP3M1Q9Y2T2 418 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 PCDHB3Q9Y5E6 796 aa17.64■□□□□ 0.42
COMMD4-213ENST00000565834 A0A1W2PS29 197 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 CLIC1O00299 241 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 POLR1CO15160 346 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-213ENST00000565834 LDB3O75112 727 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 TIAF1O95411 115 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 HBQ1P09105 142 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms