RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ELAVL4P26378 380 aaKnown RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 PTGER4P35408 488 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PIGAP37287 484 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 STT3AP46977 705 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PIK3CGP48736 1102 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 DNASE1L1P49184 302 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 MAN2A2P49641 1150 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 FOLH1Q04609 750 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PCDH1Q08174 1060 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 SETDB1Q15047 1291 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PCBP2Q15366 365 aaKnown RBP eCLIP5.94□□□□□ -1.46
TCF4-228ENST00000565393 NDUFAF5Q5TEU4 345 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 HLA-DQA1Q5Y7H0 255 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 GK5Q6ZS86 529 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 SLC29A4Q7RTT9 530 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 GDF7Q7Z4P5 450 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 GOLGA7Q7Z5G4 137 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 MILR1Q7Z6M3 343 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 CD163Q86VB7 1156 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 CHERPQ8IWX8 916 aaKnown RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 OR5M3Q8NGP4 307 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 UHMK1Q8TAS1 419 aaKnown RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 SLC22A8Q8TCC7 542 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 ZNF721Q8TF20 911 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PHF10Q8WUB8 498 aaKnown RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 CHTF18Q8WVB6 975 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 ASB5Q8WWX0 329 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 RIT1Q92963 219 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 UCN3Q969E3 161 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 PHF21BQ96EK2 531 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 ART5Q96L15 291 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 SGCZQ96LD1 299 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 JSRP1Q96MG2 331 aaPredicted RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 DMRTA2Q96SC8 542 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 CNPPD1Q9BV87 410 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 TTTY12Q9BZ98 90 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 UCK2Q9BZX2 261 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 TSPYL1Q9H0U9 437 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 NOL11Q9H8H0 719 aaKnown RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 IL1RL2Q9HB29 575 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 KCNJ16Q9NPI9 418 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 ASH1LQ9NR48 2969 aaKnown RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.94□□□□□ -1.46
TCF4-228ENST00000565393 AHSPQ9NZD4 102 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 ACAD8Q9UKU7 415 aa5.94□□□□□ -1.46
TCF4-228ENST00000565393 TLN1Q9Y490 2541 aaKnown RBP5.94□□□□□ -1.46
TCF4-228ENST00000565393 SPTA1P02549 2419 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 HECTD1Q9ULT8 2610 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 C2orf92A0A1B0GVN3 265 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 CCDC189A1A4V9 331 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 HMX2A2RU54 273 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 H0YIV9 168 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 HRKO00198 91 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 FOXE1O00358 373 aaPredicted RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 BCKDKO14874 412 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 PGRMC2O15173 223 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 SMIM24O75264 130 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 EEDO75530 441 aaKnown RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 PRKRAO75569 313 aaKnown RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 KRT38O76015 456 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 ACSL3O95573 720 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 KLK1P06870 262 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 CCL3P10147 92 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 PIK3R1P27986 724 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 SERPINB3P29508 390 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 SSTR2P30874 369 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 BSGP35613 385 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 DEKP35659 375 aaKnown RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 MAGEA5P43359 124 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 SERPINB8P50452 374 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 NR0B1P51843 470 aaKnown RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 CCNG1P51959 295 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 ARFIP1P53367 373 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 HNRNPH2P55795 449 aaKnown RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 HERVK_113P63132 956 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 ERVK-8P63133 956 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 KCNJ2P63252 427 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 PLIN5Q00G26 463 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 CUL3Q13618 768 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 E2F2Q14209 437 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 MPEG1Q2M385 716 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 ZNF791Q3KP31 576 aaPredicted RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 CCNYL2Q5T2Q4 361 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 WLSQ5T9L3 541 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 LGSNQ5TDP6 509 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 TMEM198Q66K66 360 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 MEX3BQ6ZN04 569 aaKnown RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 DGAT2L6Q6ZPD8 337 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 ACAD11Q709F0 780 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 TAOK1Q7L7X3 1001 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 CCDC71Q8IV32 467 aaPredicted RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 CENPLQ8N0S6 344 aaPredicted RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 TAGAPQ8N103 731 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 PLD6Q8N2A8 252 aaKnown RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 ZCCHC7Q8N3Z6 543 aaKnown RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 SLC15A4Q8N697 577 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 TMEM251Q8N6I4 163 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 PTGR2Q8N8N7 351 aaPredicted RBP5.93□□□□□ -1.46
TCF4-228ENST00000565393 GOLM1Q8NBJ4 401 aa5.93□□□□□ -1.46
TCF4-228ENST00000565393 FAM13CQ8NE31 585 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms