RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 BSGP35613 385 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 STT3AP46977 705 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 NEK2P51955 445 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 PHEXP78562 749 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 FOLH1Q04609 750 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 IL20RBQ6UXL0 311 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 C3P1Q6ZMU1 363 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 DGAT2L6Q6ZPD8 337 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 CEP128Q6ZU80 1094 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 GPR180Q86V85 440 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 DOLPP1Q86YN1 238 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 GPALPP1Q8IXQ4 340 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 ZFP62Q8NB50 900 aaPredicted RBP9.3□□□□□ -0.92
CMTM3-209ENST00000565003 OR52B6Q8NGF0 335 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 OR8K3Q8NH51 312 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 UHMK1Q8TAS1 419 aaKnown RBP9.3□□□□□ -0.92
CMTM3-209ENST00000565003 WDR20Q8TBZ3 569 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 DOK4Q8TEW6 326 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 AGAP11Q8TF27 550 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 DCAKDQ8WVC6 231 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 IFT81Q8WYA0 676 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 REPS1Q96D71 796 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 PHF21BQ96EK2 531 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 SCYL1Q96KG9 808 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 NSUN5Q96P11 429 aaKnown RBP9.3□□□□□ -0.92
CMTM3-209ENST00000565003 DGAT2Q96PD7 388 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 CENPKQ9BS16 269 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 NOL11Q9H8H0 719 aaKnown RBP9.3□□□□□ -0.92
CMTM3-209ENST00000565003 XPR1Q9UBH6 696 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 PCTPQ9UKL6 214 aa9.3□□□□□ -0.92
CMTM3-209ENST00000565003 TNPO3Q9Y5L0 923 aaKnown RBP9.3□□□□□ -0.92
CMTM3-209ENST00000565003 A0A1B0GTL3 188 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 A0A1W2PR48 441 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 GLOD5A6NK44 160 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 POC1B-GALNT4F8VUJ3 575 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 G3V3Y1 287 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 PROM1O43490 865 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 CDC40O60508 579 aaKnown RBP eCLIP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 IGKV3-11P04433 115 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 CTAGE8P0CG41 777 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 COX7A2P14406 83 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 PTX3P26022 381 aaPredicted RBP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 HTR1EP28566 365 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 ARL1P40616 181 aaPredicted RBP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 SERPINB9P50453 376 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 ARFIP1P53367 373 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 PLIN5Q00G26 463 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 ASPHQ12797 758 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 TRAF3Q13114 568 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 CUL3Q13618 768 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF630Q2M218 657 aaPredicted RBP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF750Q32MQ0 723 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 FAM219BQ5XKK7 198 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 MRM1Q6IN84 353 aaKnown RBP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 METTL2BQ6P1Q9 378 aaKnown RBP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 XKRXQ6PP77 449 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 CTAGE4Q8IX94 777 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 C9orf40Q8IXQ3 194 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 MNS1Q8NEH6 495 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 OR2M7Q8NG81 312 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 OR52N2Q8NGI0 321 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 UCN3Q969E3 161 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 PPWD1Q96BP3 646 aaKnown RBP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 SENP5Q96HI0 755 aaPredicted RBP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 DMRTA2Q96SC8 542 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 TSPYL1Q9H0U9 437 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 DDX31Q9H8H2 851 aaKnown RBP9.29□□□□□ -0.92
CMTM3-209ENST00000565003 ZBTB26Q9HCK0 441 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 MS4A12Q9NXJ0 267 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 COPS7AQ9UBW8 275 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 PHF11Q9UIL8 331 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 ZNF180Q9UJW8 692 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 ASB4Q9Y574 426 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 CELSR2Q9HCU4 2923 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 CRYBG3Q68DQ2 2970 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 MYO9AB2RTY4 2548 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 CREBBPQ92793 2442 aa9.29□□□□□ -0.92
CMTM3-209ENST00000565003 CSMD1Q96PZ7 3565 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 CACNA1CQ13936 2221 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 PKDREJQ9NTG1 2253 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 A0A1W2PS29 197 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 FAM166BA8MTA8 275 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 TRIM49D1C9J1S8 452 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 E9PLN8 166 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 STX16-NPEPL1H3BU86 382 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 C19orf84I3L1E1 186 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 FOXE1O00358 373 aaPredicted RBP9.28□□□□□ -0.92
CMTM3-209ENST00000565003 STX16O14662 325 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 PRRG2O14669 202 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 KRT38O76015 456 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 PDE9AO76083 593 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 CLDN9O95484 217 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 AIFM1O95831 613 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 GBAP04062 536 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 TPOP07202 933 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 RBP1P09455 135 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 SBK3P0C264 359 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 FAM58BPP0C7Q3 252 aa9.28□□□□□ -0.92
CMTM3-209ENST00000565003 NR2F6P10588 404 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms